/[genomes]/quickload
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Index of /quickload

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Directory revision: 47 (of 160)
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File Rev. Age Author Last log entry
 Parent Directory        
A_gambiae_Feb_2003/  4  3 years  aloraine   Add 2003 mosquito (malaria vector) genome assembly, EST, mRNA, and gene model an…
A_lyrata_Apr_2011/  5  3 years  aloraine   Add Arabidopsis lyrata genome assembly and annotations, from Phytozome
A_melanoleuca_Dec_2009/  6  3 years  aloraine   Add latest panda genome assembly
A_mellifera_Jan_2005/  12  3 years  aloraine   Add latest honeybee assembly Jan 2005 Baylor 2.0/apiMel2
A_thaliana_Apr_2008/  13  3 years  aloraine   Add TAIR8 genome assembly
A_thaliana_Jun_2009/  1  3 years  aloraine   Add Arabidopsis thaliana TAIR9/10 genome assembly sequence file and annotations …
B_distachyon_Aug_2010/  14  3 years  aloraine   Add Brachypodium distachyon JGI v1.0 8x assembly
B_taurus_Oct_2011/  16  3 years  aloraine   Add Bos taurus (Oct 2011) cow (Baylor Btau_4.6.1/bosTau7)
C_albicans_SC5314_Nov_2008/  11  3 years  aloraine   Add assemblies from www.candidagenome.org
C_albicans_WO-1_Jul_2010/  11  3 years  aloraine   Add assemblies from www.candidagenome.org
C_elegans_May_2008/  18  3 years  aloraine   Add C elegans assembles: May 2008 (WS190/ce6) and Oct 2010 (WS220/ce10)
C_elegans_Oct_2010/  18  3 years  aloraine   Add C elegans assembles: May 2008 (WS190/ce6) and Oct 2010 (WS220/ce10)
C_papaya_Aug_2010/  19  3 years  aloraine   Add Carica papaya genome assembly, from Phytozome
C_porcellus_Feb_2008/  20  3 years  aloraine   Add Cavia porcellus (Feb 2008) guinea pig (cavPor3) assembly
C_reinhardtii_Nov_2010/  21  3 years  aloraine   Add Chlamydomonas reinhardtii JGI v4 assembly
C_sativa_DH55_Apr_2014/  22  3 years  aloraine   Add Camelina sativa (false flax) April 2014 assembly
D_discoideum_Ax4_May_2009/  23  3 years  aloraine   Add Dictyostelim discoideum (slime mold) May 2009 assembly and annotations, from…
D_melanogaster_Apr_2006/  24  3 years  aloraine   Add Drosophila melanogaster (Apr 2006) fruit fly (dm3/BDGP R5) assembly, collect…
D_melanogaster_Jul_2014/  25  3 years  aloraine   Add Drosophila melanogaster (Jul 2014) fruit fly (dmel_r6.03_FB2014_06) assembly…
D_rerio_Jul_2010/  26  3 years  aloraine   Add Danio rerio (Jul 2010) zebrafish (danRer7/Zv9) assembly and annotations
E_caballus_Sep_2007/  27  3 years  aloraine   Add Equus caballus (Sep 2007) horse (equCab2) genome assembly and annotations
E_coli_K12-MG1655_Jan_2012/  30  3 years  aloraine   Add HEADER (same as for UCSC genomes)
F_catus_Sep_2011/  31  3 years  aloraine   Add Felis catus (Sep 2011) cat (ICGSC Felis_catus 6.2/felCat5) genome assembly c…
F_vesca_Sep_2011/  32  3 years  aloraine   Add Fragaria vesca (woodland strawberry) v1
G_gallus_Nov_2011/  33  3 years  aloraine   Add Gallus gallus (Nov 2011) chicken (galGal4/ICGC Gallus-gallus-4.0) assembly a…
G_max_Aug_2010/  34  3 years  aloraine   Add Glycine max Glyma1 soybean genome assembly and annotations, collected from P…
G_max_Jan_2014/  35  3 years  aloraine   Add Glycine max (soybean) Gmax_275_v2.0 genome assembly and annotations, collect…
H_sapiens_Dec_2013/  15  3 years  aloraine   Add Homo sapiens Mar 2006 NCBI36/hg18 assembly
H_sapiens_Feb_2009/  15  3 years  aloraine   Add Homo sapiens Mar 2006 NCBI36/hg18 assembly
H_sapiens_Mar_2006/  15  3 years  aloraine   Add Homo sapiens Mar 2006 NCBI36/hg18 assembly
H_sapiens_May_2004/  17  3 years  aloraine   Add Homo sapiens Mar 2006 NCBI36/hg18 assembly
L_africana_Jul_2009/  36  3 years  aloraine   Add Loxodonta africana (Jul 2009) elephant (loxAfr3), collected from UCSC
M_acuminata_DH_Pahang_Jan_2016/  37  3 years  aloraine   Add Musa acuminata DH Pahang (Jan 2016) banana (v2) genome assembly and annotati…
M_domestica_Borkh_Jun_2017/  38  3 years  aloraine   Add Malus domestica Borkh (GDDH13 Version 1.1) apple genome assembly and annotat…
M_musculus_Dec_2011/  39  3 years  aloraine   Add mouse genomes mm8, mm9, mm10
M_musculus_Feb_2006/  39  3 years  aloraine   Add mouse genomes mm8, mm9, mm10
M_musculus_Jul_2007/  39  3 years  aloraine   Add mouse genomes mm8, mm9, mm10
M_truncatula_Mar_2009/  40  3 years  aloraine   Add Medicago truncatula Mt3.0 release from Phytozome v7
N_vectensis_Jun_2007/  42  3 years  aloraine   Add Nematostella vectensis, starlet sea anemone
O_aries_Feb_2010/  41  3 years  aloraine   Add Ovis aries (Feb 2010) sheep (ISGC Ovis_aries_1/oviAri1) genome assembly, col…
O_sativa_japonica_Jun_2009/  43  3 years  aloraine   Add Oryza sativa japonica June 2009 and Oryza sativa japonica variety Os-Nipponb…
O_sativa_japonica_Oct_2011/  43  3 years  aloraine   Add Oryza sativa japonica June 2009 and Oryza sativa japonica variety Os-Nipponb…
P_patens_Jan_2008/  44  3 years  aloraine   Add Physcomitrella patens Jan 2008 genome from CossMoss
P_persica_Apr_2010/  45  3 years  aloraine   Add Prunus persica v1 genome assembly, collected from Phytozome v7
P_trichocarpa_Aug_2012/  46  3 years  aloraine   Add Populus trichocarpa v2 and v3 genomes, collected from Phytozome
P_trichocarpa_Jan_2010/  46  3 years  aloraine   Add Populus trichocarpa v2 and v3 genomes, collected from Phytozome
P_troglodytes_Oct_2010/  47  3 years  aloraine   Add Pan troglodytes (Oct 2010) chimpanzee (CGSC 2.1.3/panTro3) collected from UC…
S_cerevisiae_Jun_2008/  8  3 years  aloraine   Describe contents
HEADER.md  3  3 years  aloraine   Describe what a Quickload site is
contents.txt  29  3 years  aloraine   Remove 2008 cat genome; re-order rows
favicon.ico  2  3 years  aloraine   Show this in place of a folder icon in IGB Available Data Sets browser

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