Log of /quickload
Directory Listing
Revision
86 -
Directory Listing
Modified
Mon Dec 10 20:02:12 2018 UTC
(5 years, 8 months ago)
by
aloraine
Add HEADER.md for rat & cow; Fix error
Revision
85 -
Directory Listing
Modified
Mon Dec 10 19:58:13 2018 UTC
(5 years, 8 months ago)
by
aloraine
Add bosTaur8 from UCSC Genome Bioinformatics
Revision
84 -
Directory Listing
Modified
Wed Nov 7 23:17:59 2018 UTC
(5 years, 10 months ago)
by
aloraine
Add description for potato, budding yeast, copied from contents.txt
Revision
83 -
Directory Listing
Modified
Wed Nov 7 22:53:14 2018 UTC
(5 years, 10 months ago)
by
aloraine
Add rat genome rn6
Revision
82 -
Directory Listing
Modified
Mon Nov 5 23:25:44 2018 UTC
(5 years, 10 months ago)
by
aloraine
Add rn6 (rat)
Revision
81 -
Directory Listing
Modified
Sat Oct 27 01:49:24 2018 UTC
(5 years, 10 months ago)
by
aloraine
Fix typos. Improve wording - make more succinct
Revision
80 -
Directory Listing
Modified
Sat Oct 27 01:44:05 2018 UTC
(5 years, 10 months ago)
by
aloraine
Remove broken link to UCSC downloads page (it moved)
Revision
79 -
Directory Listing
Modified
Sat Oct 27 01:34:05 2018 UTC
(5 years, 10 months ago)
by
aloraine
Fix typo; Suggest that psl files may not be available for every assembly
Revision
78 -
Directory Listing
Modified
Sat Oct 27 01:26:56 2018 UTC
(5 years, 10 months ago)
by
aloraine
Explain contents of newly added mm7 genome version directory
Revision
77 -
Directory Listing
Modified
Sat Oct 27 01:22:16 2018 UTC
(5 years, 10 months ago)
by
aloraine
Add M_musculus_Aug_2005Mus musculus (Aug 2005) mouse (NCBI35/mm7) assembly
Revision
76 -
Directory Listing
Modified
Tue Oct 9 17:55:15 2018 UTC
(5 years, 11 months ago)
by
aloraine
Load Araport gene models instead of TAIR10 mRNA
Revision
75 -
Directory Listing
Modified
Thu Oct 4 16:27:04 2018 UTC
(5 years, 11 months ago)
by
aloraine
Support potato genome
Revision
73 -
Directory Listing
Modified
Thu Oct 4 16:20:24 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add v4.03 July 2011 sequence for potato genome assembly
Revision
72 -
Directory Listing
Modified
Thu Oct 4 16:17:53 2018 UTC
(5 years, 11 months ago)
by
aloraine
Remove Jan 2016 sequence, update chromosome listing file for Jul 2011 4.03 assembly, add annotations
Revision
70 -
Directory Listing
Modified
Thu Oct 4 15:48:14 2018 UTC
(5 years, 11 months ago)
by
aloraine
Use version 4.03 released Jul 2011 instead
Revision
69 -
Directory Listing
Modified
Thu Oct 4 15:18:06 2018 UTC
(5 years, 11 months ago)
by
aloraine
Fix typo; Version 4.03 not version 4.04
Revision
67 -
Directory Listing
Modified
Thu Sep 27 22:00:02 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add link to quickload repo in viewvc
Revision
66 -
Directory Listing
Modified
Thu Sep 27 21:55:57 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add configuration file for style; Assumes styling directory is in DocumentRoot
Revision
65 -
Directory Listing
Modified
Thu Sep 27 17:07:58 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Lotmaria passim, strain SF, Crithidia mellificae strain SF, whole genome shotgun sequencing project, genome assembly and annotations (files by Nowlan Freese)
Revision
64 -
Directory Listing
Modified
Thu Sep 27 17:02:57 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Zea Mays B73 RefGenv2 genome assembly and annotations, from Maize genome database
Revision
63 -
Directory Listing
Modified
Thu Sep 27 16:57:14 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Y_lipolytica genomes, collected from Genbank
Revision
62 -
Directory Listing
Modified
Thu Sep 27 16:53:23 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add 12X March 2010 wine grape draft genome Vitis vinifera genome assembly
Revision
61 -
Directory Listing
Modified
Thu Sep 27 16:46:52 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Volvox carteri f. nagariensis, Eve Jul 2010 assembly, collected from Phytozome
Revision
60 -
Directory Listing
Modified
Thu Sep 27 16:44:53 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Thellungiella parvula (salt cress) v2, May 2012 genome assembly
Revision
59 -
Directory Listing
Modified
Thu Sep 27 16:21:12 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Thermococcus kodakaraensis May 2004 genome, collected from Genbank accession NC_006624
Revision
58 -
Directory Listing
Modified
Thu Sep 27 16:20:02 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Tribolium castaneum (March 2008) red flour beetle
Revision
57 -
Directory Listing
Modified
Thu Sep 27 16:10:12 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add S. pombe (May 2012) fission yeast genome assembly and annotations
Revision
56 -
Directory Listing
Modified
Thu Sep 27 16:09:36 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Solanum lycopersicum (tomato) May 2012/SL2.40 genome assembly
Revision
55 -
Directory Listing
Modified
Thu Sep 27 16:03:02 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Solanum lycopersicum (tomato) May 2012/SL2.40 and Feb 2014/SL2.50 genome assemblies and annotations
Revision
54 -
Directory Listing
Modified
Thu Sep 27 15:59:21 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add S. cerevisiae strain S288C (Apr 2011) budding yeast (sacCer3) genome assembly and annotations, collected from UCSC
Revision
53 -
Directory Listing
Modified
Thu Sep 27 15:54:40 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Sorghum bicolor v1.0 and v2.0 (June 2013) genome assemblies, collected from Phytozome
Revision
52 -
Directory Listing
Modified
Thu Sep 27 15:51:15 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Ricinis communis TIGR/JCVI v0.1 assembly, castor bean
Revision
51 -
Directory Listing
Modified
Thu Sep 27 15:37:21 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add JGI4.2/xenTro3 Xenopus tropicalis genome, Nov 2009 genome assembly and annotations, collected from UCSC
Revision
50 -
Directory Listing
Modified
Thu Sep 27 15:35:20 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Rattus Norvegicus (Mar 2012) rat (RGSC 5.0/rn5) genome assembly collected from UCSC
Revision
49 -
Directory Listing
Modified
Thu Sep 27 15:32:16 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Strapdown js and css files for more user-friendly look in Web browsers
Revision
48 -
Directory Listing
Modified
Thu Sep 27 15:29:58 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Takifugu rubripes (Oct 2011) Fugu (FUGU5/fr3) genome assembly and annotations from UCSC
Revision
47 -
Directory Listing
Modified
Thu Sep 27 15:28:01 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Pan troglodytes (Oct 2010) chimpanzee (CGSC 2.1.3/panTro3) collected from UCSC
Revision
46 -
Directory Listing
Modified
Thu Sep 27 15:23:52 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Populus trichocarpa v2 and v3 genomes, collected from Phytozome
Revision
45 -
Directory Listing
Modified
Thu Sep 27 15:21:28 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Prunus persica v1 genome assembly, collected from Phytozome v7
Revision
44 -
Directory Listing
Modified
Thu Sep 27 15:19:32 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Physcomitrella patens Jan 2008 genome from CossMoss
Revision
43 -
Directory Listing
Modified
Thu Sep 27 15:15:02 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Oryza sativa japonica June 2009 and Oryza sativa japonica variety Os-Nipponbare-Reference-IRGSP-1.0 genome assemblies and annotations
Revision
42 -
Directory Listing
Modified
Thu Sep 27 15:12:10 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Nematostella vectensis, starlet sea anemone
Revision
41 -
Directory Listing
Modified
Thu Sep 27 15:11:05 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Ovis aries (Feb 2010) sheep (ISGC Ovis_aries_1/oviAri1) genome assembly, collected from UCSC
Revision
40 -
Directory Listing
Modified
Thu Sep 27 15:05:33 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Medicago truncatula Mt3.0 release from Phytozome v7
Revision
39 -
Directory Listing
Modified
Thu Sep 27 14:59:57 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add mouse genomes mm8, mm9, mm10
Revision
38 -
Directory Listing
Modified
Thu Sep 27 14:50:39 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Malus domestica Borkh (GDDH13 Version 1.1) apple genome assembly and annotations
Revision
37 -
Directory Listing
Modified
Thu Sep 27 14:47:45 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Musa acuminata DH Pahang (Jan 2016) banana (v2) genome assembly and annotations
Revision
36 -
Directory Listing
Modified
Thu Sep 27 14:41:43 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Loxodonta africana (Jul 2009) elephant (loxAfr3), collected from UCSC
Revision
35 -
Directory Listing
Modified
Thu Sep 27 14:37:21 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Glycine max (soybean) Gmax_275_v2.0 genome assembly and annotations, collected from Phytozome in Feb. 2015
Revision
34 -
Directory Listing
Modified
Thu Sep 27 14:34:19 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Glycine max Glyma1 soybean genome assembly and annotations, collected from Phytozome
Revision
33 -
Directory Listing
Modified
Thu Sep 27 14:30:06 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Gallus gallus (Nov 2011) chicken (galGal4/ICGC Gallus-gallus-4.0) assembly and annotations, collected from UCSC
Revision
32 -
Directory Listing
Modified
Thu Sep 27 14:27:37 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Fragaria vesca (woodland strawberry) v1
Revision
31 -
Directory Listing
Modified
Thu Sep 27 14:20:07 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Felis catus (Sep 2011) cat (ICGSC Felis_catus 6.2/felCat5) genome assembly collected from UCSC
Revision
30 -
Directory Listing
Modified
Thu Sep 27 14:17:04 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add HEADER (same as for UCSC genomes)
Revision
29 -
Directory Listing
Modified
Thu Sep 27 14:15:35 2018 UTC
(5 years, 11 months ago)
by
aloraine
Remove 2008 cat genome; re-order rows
Revision
27 -
Directory Listing
Modified
Thu Sep 27 14:11:41 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Equus caballus (Sep 2007) horse (equCab2) genome assembly and annotations
Revision
26 -
Directory Listing
Modified
Thu Sep 27 14:08:41 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Danio rerio (Jul 2010) zebrafish (danRer7/Zv9) assembly and annotations
Revision
25 -
Directory Listing
Modified
Thu Sep 27 14:02:56 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Drosophila melanogaster (Jul 2014) fruit fly (dmel_r6.03_FB2014_06) assembly, collected from FlyBase
Revision
24 -
Directory Listing
Modified
Thu Sep 27 14:00:32 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Drosophila melanogaster (Apr 2006) fruit fly (dm3/BDGP R5) assembly, collected from UCSC
Revision
23 -
Directory Listing
Modified
Thu Sep 27 13:58:58 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Dictyostelim discoideum (slime mold) May 2009 assembly and annotations, from DictyDB
Revision
22 -
Directory Listing
Modified
Thu Sep 27 13:57:07 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Camelina sativa (false flax) April 2014 assembly
Revision
21 -
Directory Listing
Modified
Thu Sep 27 13:55:37 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Chlamydomonas reinhardtii JGI v4 assembly
Revision
20 -
Directory Listing
Modified
Thu Sep 27 13:54:35 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Cavia porcellus (Feb 2008) guinea pig (cavPor3) assembly
Revision
19 -
Directory Listing
Modified
Thu Sep 27 13:50:44 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Carica papaya genome assembly, from Phytozome
Revision
18 -
Directory Listing
Modified
Thu Sep 27 13:48:26 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add C elegans assembles: May 2008 (WS190/ce6) and Oct 2010 (WS220/ce10)
Revision
17 -
Directory Listing
Modified
Thu Sep 27 13:46:05 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Homo sapiens Mar 2006 NCBI36/hg18 assembly
Revision
16 -
Directory Listing
Modified
Thu Sep 27 13:41:08 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Bos taurus (Oct 2011) cow (Baylor Btau_4.6.1/bosTau7)
Revision
15 -
Directory Listing
Modified
Thu Sep 27 13:37:28 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Homo sapiens Mar 2006 NCBI36/hg18 assembly
Revision
14 -
Directory Listing
Modified
Thu Sep 27 13:32:54 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Brachypodium distachyon JGI v1.0 8x assembly
Revision
13 -
Directory Listing
Modified
Thu Sep 27 13:29:20 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add TAIR8 genome assembly
Revision
12 -
Directory Listing
Modified
Thu Sep 27 13:27:26 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add latest honeybee assembly Jan 2005 Baylor 2.0/apiMel2
Revision
11 -
Directory Listing
Modified
Thu Sep 27 13:19:16 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add assemblies from www.candidagenome.org
Revision
10 -
Directory Listing
Modified
Wed Sep 26 22:23:41 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Feb 2009 GRCh37/hg19 human genome assembly
Revision
9 -
Directory Listing
Modified
Wed Sep 26 22:18:04 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add latest human genome version, with annotations, collected by Nowlan Freese
Revision
8 -
Directory Listing
Modified
Wed Sep 26 22:01:04 2018 UTC
(5 years, 11 months ago)
by
aloraine
Describe contents
Revision
7 -
Directory Listing
Modified
Wed Sep 26 21:51:10 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add 2008 budding yeast genome assembly, with annotations; Add contents file with available genomes
Revision
6 -
Directory Listing
Modified
Wed Sep 26 21:27:36 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add latest panda genome assembly
Revision
5 -
Directory Listing
Modified
Wed Sep 26 21:15:00 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Arabidopsis lyrata genome assembly and annotations, from Phytozome
Revision
4 -
Directory Listing
Modified
Wed Sep 26 20:23:53 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add 2003 mosquito (malaria vector) genome assembly, EST, mRNA, and gene model annotations
Revision
3 -
Directory Listing
Modified
Wed Sep 26 20:21:58 2018 UTC
(5 years, 11 months ago)
by
aloraine
Describe what a Quickload site is
Revision
2 -
Directory Listing
Modified
Wed Sep 26 20:18:10 2018 UTC
(5 years, 11 months ago)
by
aloraine
Show this in place of a folder icon in IGB Available Data Sets browser
Revision
1 -
Directory Listing
Added
Wed Sep 26 18:26:11 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add Arabidopsis thaliana TAIR9/10 genome assembly sequence file and annotations