Log of /quickload
Directory Listing
Revision
87 -
Directory Listing
Modified
Fri Dec 21 18:14:12 2018 UTC
(5 years, 11 months ago)
by
aloraine
Add zebrafish May 2017 genome and annotations
Revision
86 -
Directory Listing
Modified
Mon Dec 10 20:02:12 2018 UTC
(6 years ago)
by
aloraine
Add HEADER.md for rat & cow; Fix error
Revision
85 -
Directory Listing
Modified
Mon Dec 10 19:58:13 2018 UTC
(6 years ago)
by
aloraine
Add bosTaur8 from UCSC Genome Bioinformatics
Revision
84 -
Directory Listing
Modified
Wed Nov 7 23:17:59 2018 UTC
(6 years, 1 month ago)
by
aloraine
Add description for potato, budding yeast, copied from contents.txt
Revision
83 -
Directory Listing
Modified
Wed Nov 7 22:53:14 2018 UTC
(6 years, 1 month ago)
by
aloraine
Add rat genome rn6
Revision
82 -
Directory Listing
Modified
Mon Nov 5 23:25:44 2018 UTC
(6 years, 1 month ago)
by
aloraine
Add rn6 (rat)
Revision
81 -
Directory Listing
Modified
Sat Oct 27 01:49:24 2018 UTC
(6 years, 1 month ago)
by
aloraine
Fix typos. Improve wording - make more succinct
Revision
80 -
Directory Listing
Modified
Sat Oct 27 01:44:05 2018 UTC
(6 years, 1 month ago)
by
aloraine
Remove broken link to UCSC downloads page (it moved)
Revision
79 -
Directory Listing
Modified
Sat Oct 27 01:34:05 2018 UTC
(6 years, 1 month ago)
by
aloraine
Fix typo; Suggest that psl files may not be available for every assembly
Revision
78 -
Directory Listing
Modified
Sat Oct 27 01:26:56 2018 UTC
(6 years, 1 month ago)
by
aloraine
Explain contents of newly added mm7 genome version directory
Revision
77 -
Directory Listing
Modified
Sat Oct 27 01:22:16 2018 UTC
(6 years, 1 month ago)
by
aloraine
Add M_musculus_Aug_2005Mus musculus (Aug 2005) mouse (NCBI35/mm7) assembly
Revision
76 -
Directory Listing
Modified
Tue Oct 9 17:55:15 2018 UTC
(6 years, 2 months ago)
by
aloraine
Load Araport gene models instead of TAIR10 mRNA
Revision
75 -
Directory Listing
Modified
Thu Oct 4 16:27:04 2018 UTC
(6 years, 2 months ago)
by
aloraine
Support potato genome
Revision
73 -
Directory Listing
Modified
Thu Oct 4 16:20:24 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add v4.03 July 2011 sequence for potato genome assembly
Revision
72 -
Directory Listing
Modified
Thu Oct 4 16:17:53 2018 UTC
(6 years, 2 months ago)
by
aloraine
Remove Jan 2016 sequence, update chromosome listing file for Jul 2011 4.03 assembly, add annotations
Revision
70 -
Directory Listing
Modified
Thu Oct 4 15:48:14 2018 UTC
(6 years, 2 months ago)
by
aloraine
Use version 4.03 released Jul 2011 instead
Revision
69 -
Directory Listing
Modified
Thu Oct 4 15:18:06 2018 UTC
(6 years, 2 months ago)
by
aloraine
Fix typo; Version 4.03 not version 4.04
Revision
67 -
Directory Listing
Modified
Thu Sep 27 22:00:02 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add link to quickload repo in viewvc
Revision
66 -
Directory Listing
Modified
Thu Sep 27 21:55:57 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add configuration file for style; Assumes styling directory is in DocumentRoot
Revision
65 -
Directory Listing
Modified
Thu Sep 27 17:07:58 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Lotmaria passim, strain SF, Crithidia mellificae strain SF, whole genome shotgun sequencing project, genome assembly and annotations (files by Nowlan Freese)
Revision
64 -
Directory Listing
Modified
Thu Sep 27 17:02:57 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Zea Mays B73 RefGenv2 genome assembly and annotations, from Maize genome database
Revision
63 -
Directory Listing
Modified
Thu Sep 27 16:57:14 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Y_lipolytica genomes, collected from Genbank
Revision
62 -
Directory Listing
Modified
Thu Sep 27 16:53:23 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add 12X March 2010 wine grape draft genome Vitis vinifera genome assembly
Revision
61 -
Directory Listing
Modified
Thu Sep 27 16:46:52 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Volvox carteri f. nagariensis, Eve Jul 2010 assembly, collected from Phytozome
Revision
60 -
Directory Listing
Modified
Thu Sep 27 16:44:53 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Thellungiella parvula (salt cress) v2, May 2012 genome assembly
Revision
59 -
Directory Listing
Modified
Thu Sep 27 16:21:12 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Thermococcus kodakaraensis May 2004 genome, collected from Genbank accession NC_006624
Revision
58 -
Directory Listing
Modified
Thu Sep 27 16:20:02 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Tribolium castaneum (March 2008) red flour beetle
Revision
57 -
Directory Listing
Modified
Thu Sep 27 16:10:12 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add S. pombe (May 2012) fission yeast genome assembly and annotations
Revision
56 -
Directory Listing
Modified
Thu Sep 27 16:09:36 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Solanum lycopersicum (tomato) May 2012/SL2.40 genome assembly
Revision
55 -
Directory Listing
Modified
Thu Sep 27 16:03:02 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Solanum lycopersicum (tomato) May 2012/SL2.40 and Feb 2014/SL2.50 genome assemblies and annotations
Revision
54 -
Directory Listing
Modified
Thu Sep 27 15:59:21 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add S. cerevisiae strain S288C (Apr 2011) budding yeast (sacCer3) genome assembly and annotations, collected from UCSC
Revision
53 -
Directory Listing
Modified
Thu Sep 27 15:54:40 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Sorghum bicolor v1.0 and v2.0 (June 2013) genome assemblies, collected from Phytozome
Revision
52 -
Directory Listing
Modified
Thu Sep 27 15:51:15 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Ricinis communis TIGR/JCVI v0.1 assembly, castor bean
Revision
51 -
Directory Listing
Modified
Thu Sep 27 15:37:21 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add JGI4.2/xenTro3 Xenopus tropicalis genome, Nov 2009 genome assembly and annotations, collected from UCSC
Revision
50 -
Directory Listing
Modified
Thu Sep 27 15:35:20 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Rattus Norvegicus (Mar 2012) rat (RGSC 5.0/rn5) genome assembly collected from UCSC
Revision
49 -
Directory Listing
Modified
Thu Sep 27 15:32:16 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Strapdown js and css files for more user-friendly look in Web browsers
Revision
48 -
Directory Listing
Modified
Thu Sep 27 15:29:58 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Takifugu rubripes (Oct 2011) Fugu (FUGU5/fr3) genome assembly and annotations from UCSC
Revision
47 -
Directory Listing
Modified
Thu Sep 27 15:28:01 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Pan troglodytes (Oct 2010) chimpanzee (CGSC 2.1.3/panTro3) collected from UCSC
Revision
46 -
Directory Listing
Modified
Thu Sep 27 15:23:52 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Populus trichocarpa v2 and v3 genomes, collected from Phytozome
Revision
45 -
Directory Listing
Modified
Thu Sep 27 15:21:28 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Prunus persica v1 genome assembly, collected from Phytozome v7
Revision
44 -
Directory Listing
Modified
Thu Sep 27 15:19:32 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Physcomitrella patens Jan 2008 genome from CossMoss
Revision
43 -
Directory Listing
Modified
Thu Sep 27 15:15:02 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Oryza sativa japonica June 2009 and Oryza sativa japonica variety Os-Nipponbare-Reference-IRGSP-1.0 genome assemblies and annotations
Revision
42 -
Directory Listing
Modified
Thu Sep 27 15:12:10 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Nematostella vectensis, starlet sea anemone
Revision
41 -
Directory Listing
Modified
Thu Sep 27 15:11:05 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Ovis aries (Feb 2010) sheep (ISGC Ovis_aries_1/oviAri1) genome assembly, collected from UCSC
Revision
40 -
Directory Listing
Modified
Thu Sep 27 15:05:33 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Medicago truncatula Mt3.0 release from Phytozome v7
Revision
39 -
Directory Listing
Modified
Thu Sep 27 14:59:57 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add mouse genomes mm8, mm9, mm10
Revision
38 -
Directory Listing
Modified
Thu Sep 27 14:50:39 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Malus domestica Borkh (GDDH13 Version 1.1) apple genome assembly and annotations
Revision
37 -
Directory Listing
Modified
Thu Sep 27 14:47:45 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Musa acuminata DH Pahang (Jan 2016) banana (v2) genome assembly and annotations
Revision
36 -
Directory Listing
Modified
Thu Sep 27 14:41:43 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Loxodonta africana (Jul 2009) elephant (loxAfr3), collected from UCSC
Revision
35 -
Directory Listing
Modified
Thu Sep 27 14:37:21 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Glycine max (soybean) Gmax_275_v2.0 genome assembly and annotations, collected from Phytozome in Feb. 2015
Revision
34 -
Directory Listing
Modified
Thu Sep 27 14:34:19 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Glycine max Glyma1 soybean genome assembly and annotations, collected from Phytozome
Revision
33 -
Directory Listing
Modified
Thu Sep 27 14:30:06 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Gallus gallus (Nov 2011) chicken (galGal4/ICGC Gallus-gallus-4.0) assembly and annotations, collected from UCSC
Revision
32 -
Directory Listing
Modified
Thu Sep 27 14:27:37 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Fragaria vesca (woodland strawberry) v1
Revision
31 -
Directory Listing
Modified
Thu Sep 27 14:20:07 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Felis catus (Sep 2011) cat (ICGSC Felis_catus 6.2/felCat5) genome assembly collected from UCSC
Revision
30 -
Directory Listing
Modified
Thu Sep 27 14:17:04 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add HEADER (same as for UCSC genomes)
Revision
29 -
Directory Listing
Modified
Thu Sep 27 14:15:35 2018 UTC
(6 years, 2 months ago)
by
aloraine
Remove 2008 cat genome; re-order rows
Revision
27 -
Directory Listing
Modified
Thu Sep 27 14:11:41 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Equus caballus (Sep 2007) horse (equCab2) genome assembly and annotations
Revision
26 -
Directory Listing
Modified
Thu Sep 27 14:08:41 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Danio rerio (Jul 2010) zebrafish (danRer7/Zv9) assembly and annotations
Revision
25 -
Directory Listing
Modified
Thu Sep 27 14:02:56 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Drosophila melanogaster (Jul 2014) fruit fly (dmel_r6.03_FB2014_06) assembly, collected from FlyBase
Revision
24 -
Directory Listing
Modified
Thu Sep 27 14:00:32 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Drosophila melanogaster (Apr 2006) fruit fly (dm3/BDGP R5) assembly, collected from UCSC
Revision
23 -
Directory Listing
Modified
Thu Sep 27 13:58:58 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Dictyostelim discoideum (slime mold) May 2009 assembly and annotations, from DictyDB
Revision
22 -
Directory Listing
Modified
Thu Sep 27 13:57:07 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Camelina sativa (false flax) April 2014 assembly
Revision
21 -
Directory Listing
Modified
Thu Sep 27 13:55:37 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Chlamydomonas reinhardtii JGI v4 assembly
Revision
20 -
Directory Listing
Modified
Thu Sep 27 13:54:35 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Cavia porcellus (Feb 2008) guinea pig (cavPor3) assembly
Revision
19 -
Directory Listing
Modified
Thu Sep 27 13:50:44 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Carica papaya genome assembly, from Phytozome
Revision
18 -
Directory Listing
Modified
Thu Sep 27 13:48:26 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add C elegans assembles: May 2008 (WS190/ce6) and Oct 2010 (WS220/ce10)
Revision
17 -
Directory Listing
Modified
Thu Sep 27 13:46:05 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Homo sapiens Mar 2006 NCBI36/hg18 assembly
Revision
16 -
Directory Listing
Modified
Thu Sep 27 13:41:08 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Bos taurus (Oct 2011) cow (Baylor Btau_4.6.1/bosTau7)
Revision
15 -
Directory Listing
Modified
Thu Sep 27 13:37:28 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Homo sapiens Mar 2006 NCBI36/hg18 assembly
Revision
14 -
Directory Listing
Modified
Thu Sep 27 13:32:54 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Brachypodium distachyon JGI v1.0 8x assembly
Revision
13 -
Directory Listing
Modified
Thu Sep 27 13:29:20 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add TAIR8 genome assembly
Revision
12 -
Directory Listing
Modified
Thu Sep 27 13:27:26 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add latest honeybee assembly Jan 2005 Baylor 2.0/apiMel2
Revision
11 -
Directory Listing
Modified
Thu Sep 27 13:19:16 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add assemblies from www.candidagenome.org
Revision
10 -
Directory Listing
Modified
Wed Sep 26 22:23:41 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Feb 2009 GRCh37/hg19 human genome assembly
Revision
9 -
Directory Listing
Modified
Wed Sep 26 22:18:04 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add latest human genome version, with annotations, collected by Nowlan Freese
Revision
8 -
Directory Listing
Modified
Wed Sep 26 22:01:04 2018 UTC
(6 years, 2 months ago)
by
aloraine
Describe contents
Revision
7 -
Directory Listing
Modified
Wed Sep 26 21:51:10 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add 2008 budding yeast genome assembly, with annotations; Add contents file with available genomes
Revision
6 -
Directory Listing
Modified
Wed Sep 26 21:27:36 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add latest panda genome assembly
Revision
5 -
Directory Listing
Modified
Wed Sep 26 21:15:00 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Arabidopsis lyrata genome assembly and annotations, from Phytozome
Revision
4 -
Directory Listing
Modified
Wed Sep 26 20:23:53 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add 2003 mosquito (malaria vector) genome assembly, EST, mRNA, and gene model annotations
Revision
3 -
Directory Listing
Modified
Wed Sep 26 20:21:58 2018 UTC
(6 years, 2 months ago)
by
aloraine
Describe what a Quickload site is
Revision
2 -
Directory Listing
Modified
Wed Sep 26 20:18:10 2018 UTC
(6 years, 2 months ago)
by
aloraine
Show this in place of a folder icon in IGB Available Data Sets browser
Revision
1 -
Directory Listing
Added
Wed Sep 26 18:26:11 2018 UTC
(6 years, 2 months ago)
by
aloraine
Add Arabidopsis thaliana TAIR9/10 genome assembly sequence file and annotations