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<files> |
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<file |
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name="Araport11.bed.gz" |
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title="Araport" |
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description="Protein-coding gene models from Araport 11, Nov. 2015" |
6 |
url="A_thaliana_Jun_2009" |
7 |
foreground="000000" |
8 |
name_size="14" |
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show2tracks="true" |
10 |
/> |
11 |
<file |
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name="AtRTD2-Van.bed.gz" |
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title="AtRTD2 Vaneechoutte 2017" |
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description="AtRTD2 gene models re-numbered and with CDS annotations from Vaneechoutte, 2017" |
15 |
url="A_thaliana_Jun_2009" |
16 |
foreground="000000" |
17 |
name_size="14" |
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show2tracks="true" |
19 |
/> |
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<file |
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name="TAIR10.bed.gz" |
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title="TAIR10 All" |
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description="All gene, transposon, non-coding RNA, and pseudogene annotations from the TAIR10 collection" |
24 |
url="A_thaliana_Jun_2009" |
25 |
name_size="14" |
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show2tracks="true" |
27 |
/> |
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<file |
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name="TDNA.bed.gz" |
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title="TDNA insertion lines" |
31 |
description="insertion lines, start of block marks insertion site" |
32 |
url="A_thaliana_Jun_2009" |
33 |
foreground="007c00" |
34 |
show2tracks="false" |
35 |
direction_type="none" |
36 |
/> |
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<file |
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name="TAIR10_mRNA.bed.gz" |
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title="TAIR10 mRNA" |
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description="TAIR10 other annotations/protein-coding gene models" |
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url="A_thaliana_Jun_2009" |
42 |
load_hint="Whole Sequence" |
43 |
foreground="000000" |
44 |
name_size="14" |
45 |
show2tracks="true" |
46 |
/> |
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<file |
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name="TAIR10_TE.bed.gz" |
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title="TAIR10 other annotations/transposable elements" |
50 |
description="transposable elements" |
51 |
url="A_thaliana_Jun_2009" |
52 |
name_size="14" |
53 |
show2tracks="true" |
54 |
/> |
55 |
<file |
56 |
name="TAIR10_TE_gene.bed.gz" |
57 |
title="TAIR10 other annotations/TE genes" |
58 |
description="transposable element gene models" |
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url="A_thaliana_Jun_2009" |
60 |
name_size="14" |
61 |
show2tracks="true" |
62 |
/> |
63 |
<file |
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name="TAIR10_miRNA.bed.gz" |
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title="TAIR10 other annotations/miRNA genes" |
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description="miRNA gene models" |
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url="A_thaliana_Jun_2009" |
68 |
name_size="14" |
69 |
show2tracks="true" |
70 |
/> |
71 |
<file |
72 |
name="TAIR10_ncRNA.bed.gz" |
73 |
title="TAIR10 other annotations/ncRNA genes" |
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description="small non-coding RNA gene models" |
75 |
url="A_thaliana_Jun_2009" |
76 |
name_size="14" |
77 |
show2tracks="true" |
78 |
/> |
79 |
<file |
80 |
name="TAIR10_pseudogene.bed.gz" |
81 |
title="TAIR10 other annotations/pseudogenes" |
82 |
description="pseudogenic transcript models" |
83 |
url="A_thaliana_Jun_2009" |
84 |
name_size="14" |
85 |
show2tracks="true" |
86 |
/> |
87 |
<file |
88 |
name="TAIR10_rRNA.bed.gz" |
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title="TAIR10 other annotations/rRNA genes" |
90 |
description="rRNA gene models" |
91 |
url="A_thaliana_Jun_2009" |
92 |
name_size="14" |
93 |
show2tracks="true" |
94 |
/> |
95 |
<file |
96 |
name="TAIR10_snoRNA.bed.gz" |
97 |
title="TAIR10 other annotations/snoRNA genes" |
98 |
description="small nucleolar RNA gene models" |
99 |
url="A_thaliana_Jun_2009" |
100 |
name_size="14" |
101 |
show2tracks="true" |
102 |
/> |
103 |
<file |
104 |
name="TAIR10_tRNA.bed.gz" |
105 |
title="TAIR10 other annotations/tRNA genes" |
106 |
description="tRNA gene models" |
107 |
url="A_thaliana_Jun_2009" |
108 |
name_size="14" |
109 |
show2tracks="true" |
110 |
/> |
111 |
<file |
112 |
name="TAIR10_snRNA.bed.gz" |
113 |
title="TAIR10 other annotations/snRNA genes" |
114 |
description="small nuclear RNA gene models" |
115 |
url="A_thaliana_Jun_2009" |
116 |
name_size="14" |
117 |
show2tracks="true" |
118 |
/> |
119 |
</files> |