quickload/C_sativa_CBDRx_Dec_2018/HEADER.md

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<h1>Cannabis sativa CBDRx (Dec 2018) genome assembly</h1>
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The files listed below are formatted for visualization in the Integrated Genome Browser, available from <a href="https://bioviz.org">BioViz.org</a>.
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<p>
The file named C_sativa_CBDRx_Dec_2018.2bit contains sequence data from <a href="http://cannabisgenome.org/cs10files/cs10.fasta.gz">http://cannabisgenome.org/cs10files/cs10.fasta.gz</a> converted to 2bit format using twoBitToFa.
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<p>
The file <a href="genome.txt">genome.txt</a> lists sequences and their
sizes. It was made from C_sativa_CBDRx_Dec_2018.2bit using twoBitInfo
and then manually edited to list C and M chromosomes after the nuclear
chromosome assemblies. Both twoBitInfo and twoBitToFa are available
from <a href="http://hgdownload.cse.ucsc.edu/admin/exe/">http://hgdownload.cse.ucsc.edu/admin/exe/</a>.
</p>
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For more information about this genome assembly, visit <a href="http://cannabisgenome.org/">cannabisgenome.org</a> and associated article <a href="https://www.biorxiv.org/content/10.1101/458083v4">A complete Cannabis chromosome assembly and adaptive admixture for elevated cannabidiol (CBD) content</a>.
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1	<html>
2	<body>
3	<h1>Cannabis sativa CBDRx (Dec 2018) genome assembly</h1>
4	<p>
5	The files listed below are formatted for visualization in the Integrated Genome Browser, available from <a href="https://bioviz.org">BioViz.org</a>.
6	</p>
7	<p>
8	The file named C_sativa_CBDRx_Dec_2018.2bit contains sequence data from <a href="http://cannabisgenome.org/cs10files/cs10.fasta.gz">http://cannabisgenome.org/cs10files/cs10.fasta.gz</a> converted to 2bit format using twoBitToFa.
9	</p>
10	<p>
11	The file <a href="genome.txt">genome.txt</a> lists sequences and their
12	sizes. It was made from C_sativa_CBDRx_Dec_2018.2bit using twoBitInfo
13	and then manually edited to list C and M chromosomes after the nuclear
14	chromosome assemblies. Both twoBitInfo and twoBitToFa are available
15	from <a href="http://hgdownload.cse.ucsc.edu/admin/exe/">http://hgdownload.cse.ucsc.edu/admin/exe/</a>.
16	</p>
17	<p>
18	For more information about this genome assembly, visit <a href="http://cannabisgenome.org/">cannabisgenome.org</a> and associated article <a href="https://www.biorxiv.org/content/10.1101/458083v4">A complete Cannabis chromosome assembly and adaptive admixture for elevated cannabidiol (CBD) content</a>.
19	</p>
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