quickload/H_exemplaris_Z151_Apr_2017/HEADER.md

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<h1>Hypsibius exemplaris strain Z151 (Apr 2017) genome assembly</h1>
<p>
The files listed below are formatted for visualization in the Integrated Genome
Browser, available from <a href="https://bioviz.org">BioViz.org</a>.
</p>
<p>
  The gene model annotation file H_exemplaris_Z151_Apr_2017.bed.gz was downloaded from the NCBI Web site as GCA_002082055.1_nHd_3.1_genomic.gff.gz and converted to BED-detail (bed14) format April 3, 2024.
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  The file named H_exemplaris_Z151_Apr_2017.2bit contains sequence data. It was made from fasta file also downloaded from <a href="https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_002082055.1/">NCBI</a>. To convert it back to fasta, use twoBitToFa. 
</p>
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  The file <a href="genome.txt">genome.txt</a> lists sequences and their sizes and was made from the 2bit sequence file using twoBitInfo.
</p>
<p>
  You can get twoBitInfo, twoBitToFa, faToTwoBit, and related programs from <a href="http://hgdownload.cse.ucsc.edu/admin/exe/">http://hgdownload.cse.ucsc.edu/admin/exe/</a>. 
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3	aloraine	182	<h1>Hypsibius exemplaris strain Z151 (Apr 2017) genome assembly</h1>
4	aloraine	181	<p>
5			The files listed below are formatted for visualization in the Integrated Genome
6			Browser, available from <a href="https://bioviz.org">BioViz.org</a>.
7			</p>
8			<p>
9			The gene model annotation file H_exemplaris_Z151_Apr_2017.bed.gz was downloaded from the NCBI Web site as GCA_002082055.1_nHd_3.1_genomic.gff.gz and converted to BED-detail (bed14) format April 3, 2024.
10			</p>
11			<p>
12			The file named H_exemplaris_Z151_Apr_2017.2bit contains sequence data. It was made from fasta file also downloaded from <a href="https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_002082055.1/">NCBI</a>. To convert it back to fasta, use twoBitToFa.
13			</p>
14			<p>
15			The file <a href="genome.txt">genome.txt</a> lists sequences and their sizes and was made from the 2bit sequence file using twoBitInfo.
16			</p>
17			<p>
18			You can get twoBitInfo, twoBitToFa, faToTwoBit, and related programs from <a href="http://hgdownload.cse.ucsc.edu/admin/exe/">http://hgdownload.cse.ucsc.edu/admin/exe/</a>.
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