/[genomes]/quickload/H_sapiens_Dec_2013/annots.xml
ViewVC logotype

Diff of /quickload/H_sapiens_Dec_2013/annots.xml

Parent Directory Parent Directory | Revision Log Revision Log | View Patch Patch

revision 131 by nfreese, Fri Oct 2 17:22:03 2020 UTC revision 170 by aloraine, Mon Mar 6 03:09:32 2023 UTC
# Line 10  Line 10 
10          background="FFFFFF"          background="FFFFFF"
11          load_hint="Whole Sequence"          load_hint="Whole Sequence"
12          show2tracks="true"          show2tracks="true"
13    />     />
14      <file name="chess3.0.GRCh38.p12.bed.gz"
15            title="CHESS gene models v.3.0"
16            description="Based on nearly 10,000 GTEx project RNA-Seq experiments re-formatted for IGB from chess3.0.gff.gz"
17            url="https://github.com/chess-genome/chess"
18            direction_type="arrow"
19            name_size="14"
20            label_field="id"
21            background="FFFFFF"
22            foreground="000000"
23            show2tracks="true"
24       />
25    <file name="H_sapiens_Dec_2013_snp153Common.bed.gz"    <file name="H_sapiens_Dec_2013_snp153Common.bed.gz"
26          title="Genetics/Common SNPs (153)"          title="Genetics/Common SNPs (153)"
27          description="Data from UCSC Table Browser - common SNPs (snp153Common table) - updated Sep 30, 2020"          description="Data from UCSC Table Browser - common SNPs (snp153Common table) - updated Sep 30, 2020"
# Line 46  Line 57 
57           label_field="id"           label_field="id"
58           show2tracks="true"           show2tracks="true"
59      />      />
60        <file name="hg38-blacklist.v2.bed.gz"
61            title="ENCODE blacklist"
62            description="ENCODE-identified problematic regions of the genome (hg38-blacklist.v2.bed.gz)"
63            url="https://github.com/Boyle-Lab/Blacklist"
64            direction_type="none"
65            name_size="12"
66            background="FFFFFF"
67            foreground="000000"
68            label_field="name"
69            show2tracks="false"
70        />
71     <file name="UCSCTracks/Assembly.bed.gz"     <file name="UCSCTracks/Assembly.bed.gz"
72          title="UCSC Tracks/Mapping and Sequencing/Assembly"          title="UCSC Tracks/Mapping and Sequencing/Assembly"
73          url="H_sapiens_Dec_2013/UCSCTracks/"          url="H_sapiens_Dec_2013/UCSCTracks/"
Legend:
Removed from v.131  
changed lines
  Added in v.170
  ViewVC Help
Powered by ViewVC 1.1.26