/[genomes]/quickload/H_sapiens_Dec_2013/annots.xml
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Contents of /quickload/H_sapiens_Dec_2013/annots.xml

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Revision 106 - (show annotations)
Tue Sep 10 20:25:45 2019 UTC (3 years ago) by aloraine
File MIME type: text/xml
File size: 3815 byte(s)
Add American eel as per community request - see IGBF-1546
1 <files>
2 <file name="H_sapiens_Dec_2013_ncbiRefSeqCurated.bed.gz"
3 title="RefSeq Curated"
4 description="Data from UCSC Table Browser - RefSeq Curated (ncbiRefSeqCurated) table - updated Mar 20, 2019"
5 url="H_sapiens_Dec_2013/"
6 foreground="000000"
7 name_size="14"
8 direction_type="arrow"
9 label_field="title"
10 background="FFFFFF"
11 load_hint="Whole Sequence"
12 show2tracks="true"
13 />
14 <file name="H_sapiens_Dec_2013_snp151Common.bed.gz"
15 title="Genetics/Common SNPs (151)"
16 description="Data from UCSC Table Browser - common SNPs (snp151Common table) - updated Mar 20, 2019"
17 url="H_sapiens_Dec_2013"
18 direction_type="none"
19 name_size="14"
20 label_field="id"
21 background="FFFFFF"
22 foreground="1B4C9B"
23 show2tracks="false"
24 />
25 <file name="H_sapiens_Dec_2013_all_est.psl.gz"
26 title="UCSC Tracks/mRNA and EST/All human EST"
27 description="Data from UCSC Table Browser - human EST alignments (all_est table) - updated Mar 21, 2019"
28 url="H_sapiens_Dec_2013"
29 direction_type="arrow"
30 max_depth="10"
31 name_size="16"
32 background="FFFFFF"
33 foreground="B71725"
34 label_field="id"
35 show2tracks="true"
36 />
37 <file name="H_sapiens_Dec_2013_all_mrna.psl.gz"
38 title="UCSC Tracks/mRNA and EST/Human mRNAs"
39 description="Data from UCSC Table Browser - human mRNA alignments (all_mrna table) - updated Mar 21, 2019"
40 url="H_sapiens_Dec_2013"
41 direction_type="arrow"
42 max_depth="10"
43 name_size="16"
44 background="FFFFFF"
45 foreground="B71725"
46 label_field="id"
47 show2tracks="true"
48 />
49 <file name="UCSCTracks/Assembly.bed.gz"
50 title="UCSC Tracks/Mapping and Sequencing/Assembly"
51 url="H_sapiens_Dec_2013/UCSCTracks/"
52 />
53 <file name="UCSCTracks/Hg19_Diff.bed.gz"
54 title="UCSC Tracks/Mapping and Sequencing/Hg19 Diff"
55 url="H_sapiens_Dec_2013/UCSCTracks/"
56 />
57 <file name="UCSCTracks/GENCODE.bed.gz"
58 title="UCSC Tracks/Genes and Gene Predictions/GENCODE"
59 url="H_sapiens_Dec_2013/UCSCTracks/"
60 />
61 <file name="H_sapiens_Dec_2013_ncbiRefSeq.bed.gz"
62 title="UCSC Tracks/Genes and Gene Predictions/RefSeq All"
63 description="Data from UCSC Table Browser - RefSeq All (ncbiRefSeq table) - updated Mar 20, 2019"
64 url="H_sapiens_Dec_2013"
65 foreground="B71725"
66 name_size="14"
67 direction_type="arrow"
68 label_field="title"
69 background="FFFFFF"
70 show2tracks="true"
71 url="H_sapiens_Dec_2013/UCSCTracks/"
72 />
73 <file name="H_sapiens_Dec_2013_refGene.bed.gz"
74 title="UCSC Tracks/Genes and Gene Predictions/RefGene (old)"
75 description="Data from UCSC Genome Browser - RefGene track, downloaded Mar 7, 2014"
76 foreground="000000"
77 name_size="14"
78 direction_type="arrow"
79 label_field="title"
80 background="FFFFFF"
81 url="H_sapiens_Dec_2013/UCSCTracks/"
82 />
83 <file name="UCSCTracks/RetroGenes_V9.bed.gz"
84 title="UCSC Tracks/Genes and Gene Predictions/RetroGenes V9"
85 url="H_sapiens_Dec_2013/UCSCTracks/"
86 />
87 <file name="UCSCTracks/CpG_Islands.bed.gz"
88 title="UCSC Tracks/Regulation/CpG Islands"
89 url="H_sapiens_Dec_2013/UCSCTracks/"
90 />
91 <file name="UCSCTracks/RepeatMasker.bed.gz"
92 <file name="UCSCTracks/RepeatMasker.bed.gz"
93 title="UCSC Tracks/Repeats/RepeatMasker"
94 url="H_sapiens_Dec_2013/UCSCTracks/"
95 />
96 <file name="UCSCTracks/RepeatMasker_Viz.bed.gz"
97 title="UCSC Tracks/Repeats/RepeatMasker Viz"
98 url="H_sapiens_Dec_2013/UCSCTracks/"
99 />
100 <file name="cytoBand.cyt"
101 title="Cytobands"
102 load_hint="Whole Sequence"
103 />
104 </files>

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