/[genomes]/quickload/H_sapiens_Dec_2013/annots.xml
ViewVC logotype

Contents of /quickload/H_sapiens_Dec_2013/annots.xml

Parent Directory Parent Directory | Revision Log Revision Log


Revision 131 - (show annotations)
Fri Oct 2 17:22:03 2020 UTC (2 years ago) by nfreese
File MIME type: text/xml
File size: 3728 byte(s)
Update descriptions, change to snp153
1 <files>
2 <file name="H_sapiens_Dec_2013_ncbiRefSeqCurated.bed.gz"
3 title="RefSeq Curated"
4 description="Data from UCSC Table Browser - RefSeq Curated (ncbiRefSeqCurated) table - updated Sep 23, 2020"
5 url="H_sapiens_Dec_2013/"
6 foreground="000000"
7 name_size="14"
8 direction_type="arrow"
9 label_field="title"
10 background="FFFFFF"
11 load_hint="Whole Sequence"
12 show2tracks="true"
13 />
14 <file name="H_sapiens_Dec_2013_snp153Common.bed.gz"
15 title="Genetics/Common SNPs (153)"
16 description="Data from UCSC Table Browser - common SNPs (snp153Common table) - updated Sep 30, 2020"
17 url="H_sapiens_Dec_2013"
18 direction_type="none"
19 name_size="14"
20 label_field="id"
21 background="FFFFFF"
22 foreground="1B4C9B"
23 show2tracks="false"
24 />
25 <file name="H_sapiens_Dec_2013_all_est.psl.gz"
26 title="UCSC Tracks/mRNA and EST/All human EST"
27 description="Data from UCSC Table Browser - human EST alignments (all_est table) - updated Sep 30, 2020"
28 url="H_sapiens_Dec_2013"
29 direction_type="arrow"
30 max_depth="10"
31 name_size="16"
32 background="FFFFFF"
33 foreground="B71725"
34 label_field="id"
35 show2tracks="true"
36 />
37 <file name="H_sapiens_Dec_2013_all_mrna.psl.gz"
38 title="UCSC Tracks/mRNA and EST/Human mRNAs"
39 description="Data from UCSC Table Browser - human mRNA alignments (all_mrna table) - updated Sep 30, 2020"
40 url="H_sapiens_Dec_2013"
41 direction_type="arrow"
42 max_depth="10"
43 name_size="16"
44 background="FFFFFF"
45 foreground="B71725"
46 label_field="id"
47 show2tracks="true"
48 />
49 <file name="UCSCTracks/Assembly.bed.gz"
50 title="UCSC Tracks/Mapping and Sequencing/Assembly"
51 url="H_sapiens_Dec_2013/UCSCTracks/"
52 />
53 <file name="UCSCTracks/Hg19_Diff.bed.gz"
54 title="UCSC Tracks/Mapping and Sequencing/Hg19 Diff"
55 url="H_sapiens_Dec_2013/UCSCTracks/"
56 />
57 <file name="UCSCTracks/GENCODE.bed.gz"
58 title="UCSC Tracks/Genes and Gene Predictions/GENCODE"
59 url="H_sapiens_Dec_2013/UCSCTracks/"
60 />
61 <file name="H_sapiens_Dec_2013_ncbiRefSeq.bed.gz"
62 title="UCSC Tracks/Genes and Gene Predictions/RefSeq All"
63 description="Data from UCSC Table Browser - RefSeq All (ncbiRefSeq table) - updated Sep 23, 2020"
64 url="H_sapiens_Dec_2013"
65 foreground="B71725"
66 name_size="14"
67 direction_type="arrow"
68 label_field="title"
69 background="FFFFFF"
70 show2tracks="true"
71 />
72 <file name="H_sapiens_Dec_2013_refGene.bed.gz"
73 title="UCSC Tracks/Genes and Gene Predictions/RefGene (old)"
74 description="Data from UCSC Genome Browser - RefGene track, updated Sep 30, 2020"
75 foreground="000000"
76 name_size="14"
77 direction_type="arrow"
78 label_field="title"
79 background="FFFFFF"
80 url="H_sapiens_Dec_2013/UCSCTracks/"
81 />
82 <file name="UCSCTracks/RetroGenes_V9.bed.gz"
83 title="UCSC Tracks/Genes and Gene Predictions/RetroGenes V9"
84 url="H_sapiens_Dec_2013/UCSCTracks/"
85 />
86 <file name="UCSCTracks/CpG_Islands.bed.gz"
87 title="UCSC Tracks/Regulation/CpG Islands"
88 url="H_sapiens_Dec_2013/UCSCTracks/"
89 />
90 <file name="UCSCTracks/RepeatMasker.bed.gz"
91 title="UCSC Tracks/Repeats/RepeatMasker"
92 url="H_sapiens_Dec_2013/UCSCTracks/"
93 />
94 <file name="UCSCTracks/RepeatMasker_Viz.bed.gz"
95 title="UCSC Tracks/Repeats/RepeatMasker Viz"
96 url="H_sapiens_Dec_2013/UCSCTracks/"
97 />
98 <file name="cytoBand.cyt"
99 title="Cytobands"
100 load_hint="Whole Sequence"
101 />
102 </files>

  ViewVC Help
Powered by ViewVC 1.1.26