/[genomes]/quickload/H_sapiens_Dec_2013/annots.xml
ViewVC logotype

Contents of /quickload/H_sapiens_Dec_2013/annots.xml

Parent Directory Parent Directory | Revision Log Revision Log


Revision 98 - (show annotations)
Sun Mar 24 18:28:56 2019 UTC (3 years, 3 months ago) by aloraine
File MIME type: text/xml
File size: 3371 byte(s)
Highlight genetics data sets; Load RefSeq Curated as new reference gene models
1 <files>
2 <file name="H_sapiens_Dec_2013_ncbiRefSeqCurated.bed.gz"
3 title="RefSeq Curated"
4 description="Data from UCSC Table Browser - RefSeq Curated (ncbiRefSeqCurated) table - updated Mar 20, 2019"
5 url="H_sapiens_Dec_2013/"
6 foreground="000000"
7 name_size="14"
8 direction_type="arrow"
9 label_field="title"
10 background="FFFFFF"
11 load_hint="Whole Sequence"
12 show2tracks="true"
13 />
14 <file name="H_sapiens_Dec_2013_snp151Common.bed.gz"
15 title="Genetics/Common SNPs (151)"
16 description="Data from UCSC Table Browser - common SNPs (snp151Common table) - updated Mar 20, 2019"
17 url="H_sapiens_Dec_2013"
18 name_size="14"
19 label_field="id"
20 background="FFFFFF"
21 foreground="000000"
22 show2tracks="false"
23 />
24 <file name="H_sapiens_Dec_2013_ncbiRefSeq.bed.gz"
25 title="UCSC Tracks/mRNA and EST/RefSeq All"
26 description="Data from UCSC Table Browser - RefSeq All (ncbiRefSeq table) - updated Mar 20, 2019"
27 url="H_sapiens_Dec_2013"
28 foreground="B71725"
29 name_size="14"
30 direction_type="arrow"
31 label_field="title"
32 background="FFFFFF"
33 show2tracks="true"
34 />
35 <file name="H_sapiens_Dec_2013_all_est.psl.gz"
36 title="UCSC Tracks/mRNA and EST/All human EST"
37 description="Data from UCSC Table Browser - human EST alignments (all_est table) - updated Mar 21, 2019"
38 url="H_sapiens_Dec_2013"
39 direction_type="arrow"
40 max_depth="10"
41 name_size="16"
42 background="FFFFFF"
43 foreground="B71725"
44 label_field="id"
45 show2tracks="true"
46 />
47 <file name="H_sapiens_Dec_2013_all_mrna.psl.gz"
48 title="UCSC Tracks/mRNA and EST/Human mRNAs"
49 description="Data from UCSC Table Browser - human mRNA alignments (all_mrna table) - updated Mar 21, 2019"
50 url="H_sapiens_Dec_2013"
51 direction_type="arrow"
52 max_depth="10"
53 name_size="16"
54 background="FFFFFF"
55 foreground="B71725"
56 label_field="id"
57 show2tracks="true"
58 />
59 <file name="UCSCTracks/Assembly.bed.gz"
60 title="UCSC Tracks/Mapping and Sequencing/Assembly"
61 />
62 <file name="UCSCTracks/Hg19_Diff.bed.gz"
63 title="UCSC Tracks/Mapping and Sequencing/Hg19 Diff"
64 />
65 <file name="UCSCTracks/GENCODE.bed.gz"
66 title="UCSC Tracks/Genes and Gene Predictions/GENCODE"
67 />
68 <file name="H_sapiens_Dec_2013_refGene.bed.gz"
69 title="UCSC Tracks/Genes and Gene Predictions/RefGene (old)"
70 description="Data from UCSC Genome Browser - RefGene track, downloaded Mar 7, 2014"
71 foreground="000000"
72 name_size="14"
73 direction_type="arrow"
74 label_field="title"
75 background="FFFFFF"
76 />
77 <file name="UCSCTracks/RetroGenes_V9.bed.gz"
78 title="UCSC Tracks/Genes and Gene Predictions/RetroGenes V9"
79 />
80 <file name="UCSCTracks/CpG_Islands.bed.gz"
81 title="UCSC Tracks/Regulation/CpG Islands"
82 />
83 <file name="UCSCTracks/RepeatMasker.bed.gz"
84 title="UCSC Tracks/Repeats/RepeatMasker"
85 />
86 <file name="UCSCTracks/RepeatMasker_Viz.bed.gz"
87 title="UCSC Tracks/Repeats/RepeatMasker Viz"
88 />
89 <file name="cytoBand.cyt"
90 title="Cytobands"
91 load_hint="Whole Sequence"
92 />
93 </files>

  ViewVC Help
Powered by ViewVC 1.1.26