/[genomes]/quickload/H_sapiens_Feb_2009/annots.xml
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Contents of /quickload/H_sapiens_Feb_2009/annots.xml

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Revision 159 - (show annotations)
Wed Sep 22 20:47:24 2021 UTC (9 months ago) by nfreese
File MIME type: text/xml
File size: 1538 byte(s)
IGBF-2696;Add hg19 ENCODE blacklist v2;Sep 22, 2021
1 <files>
2 <file name="cytoBand.cyt"
3 title="Cytobands"
4 load_hint="Whole Sequence"
5 />
6 <file name="H_sapiens_Feb_2009_refGene.bed.gz"
7 title="RefGene"
8 description="UCSC RefGene track (Nov 20, 2013)"
9 url="H_sapiens_Feb_2009/"
10 foreground="000000"
11 name_size="14"
12 direction_type="arrow"
13 label_field="title"
14 background="FFFFFF"
15 load_hint="Whole Sequence"
16 show2tracks="true"
17 />
18 <file name="H_sapiens_Feb_2009_all_mrna.psl.gz"
19 title="mRNA"
20 description="UCSC all mRNA track (Mar 27, 2013)"
21 url="H_sapiens_Feb_2009/"
22 max_depth="10"
23 background="FFFFFF"
24 foreground="B71725"
25 name_size="16"
26 label_field="id"
27 show2tracks="false"/>
28 <file name="H_sapiens_Feb_2009_all_est.psl.gz"
29 title="EST"
30 description="UCSC all EST track (Mar 27, 2013)"
31 url="H_sapiens_Feb_2009/"
32 direction_type="arrow"
33 max_depth="10"
34 name_size="16"
35 background="FFFFFF"
36 foreground="B71725"
37 label_field="id"
38 show2tracks="false"/>
39 <file name="hg19-blacklist.v2.bed.gz"
40 title="ENCODE blacklist"
41 description="ENCODE-identified problematic regions of the genome (hg19-blacklist.v2.bed.gz)"
42 url="https://github.com/Boyle-Lab/Blacklist"
43 direction_type="none"
44 name_size="12"
45 background="FFFFFF"
46 foreground="000000"
47 label_field="name"
48 show2tracks="false"/>
49 </files>

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