/[genomes]/quickload/H_sapiens_Feb_2009/annots.xml
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Annotation of /quickload/H_sapiens_Feb_2009/annots.xml

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Revision 159 - (hide annotations)
Wed Sep 22 20:47:24 2021 UTC (3 years, 2 months ago) by nfreese
File MIME type: text/xml
File size: 1538 byte(s)
IGBF-2696;Add hg19 ENCODE blacklist v2;Sep 22, 2021
1 aloraine 10 <files>
2     <file name="cytoBand.cyt"
3     title="Cytobands"
4     load_hint="Whole Sequence"
5     />
6     <file name="H_sapiens_Feb_2009_refGene.bed.gz"
7     title="RefGene"
8     description="UCSC RefGene track (Nov 20, 2013)"
9     url="H_sapiens_Feb_2009/"
10     foreground="000000"
11     name_size="14"
12     direction_type="arrow"
13     label_field="title"
14     background="FFFFFF"
15     load_hint="Whole Sequence"
16     show2tracks="true"
17     />
18     <file name="H_sapiens_Feb_2009_all_mrna.psl.gz"
19     title="mRNA"
20     description="UCSC all mRNA track (Mar 27, 2013)"
21     url="H_sapiens_Feb_2009/"
22     max_depth="10"
23     background="FFFFFF"
24     foreground="B71725"
25     name_size="16"
26     label_field="id"
27     show2tracks="false"/>
28     <file name="H_sapiens_Feb_2009_all_est.psl.gz"
29     title="EST"
30     description="UCSC all EST track (Mar 27, 2013)"
31     url="H_sapiens_Feb_2009/"
32     direction_type="arrow"
33     max_depth="10"
34     name_size="16"
35     background="FFFFFF"
36     foreground="B71725"
37     label_field="id"
38 nfreese 159 show2tracks="false"/>
39     <file name="hg19-blacklist.v2.bed.gz"
40     title="ENCODE blacklist"
41     description="ENCODE-identified problematic regions of the genome (hg19-blacklist.v2.bed.gz)"
42     url="https://github.com/Boyle-Lab/Blacklist"
43     direction_type="none"
44     name_size="12"
45     background="FFFFFF"
46     foreground="000000"
47     label_field="name"
48 aloraine 10 show2tracks="false"/>
49     </files>

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