/[genomes]/quickload/L_passim_Apr_2014/HEADER.md
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Contents of /quickload/L_passim_Apr_2014/HEADER.md

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Revision 65 - (show annotations)
Thu Sep 27 17:07:58 2018 UTC (11 months, 3 weeks ago) by aloraine
File size: 855 byte(s)
Add Lotmaria passim, strain SF, Crithidia mellificae strain SF, whole genome shotgun sequencing project, genome assembly and annotations (files by Nowlan Freese)
1 The files listed below are formatted for visualization in the Integrated
2 Genome Browser, available from [BioViz.org</u>](https://bioviz.org)
3
4 Annotation
5 and sequence data are from the paper - A draft genome of the honey bee trypanosomatid parasite Crithidia mellificae. This paper can be
6 freely found at - [http://www.ncbi.nlm.nih.gov/pubmed/24743507](http://www.ncbi.nlm.nih.gov/pubmed/24743507)
7
8 Original sequence file can be found at -
9 [http://www.ncbi.nlm.nih.gov/bioproject/PRJNA78249](http://www.ncbi.nlm.nih.gov/bioproject/PRJNA78249)
10
11 Files with extension .gz were compressed and indexed using bgzip and tabix
12 tools from [samtools.sourceforge.net](http://samtools.sourceforge.net/).
13
14 To convert a .2bit to fasta, use twoBitToFa. twoBitToFa is available
15 from [http://hgdownload.cse.ucsc.edu/admin/exe/](http://hgdownload.cse.ucsc.edu/admin/exe/).

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