| 1 |
aloraine |
39 |
<files> |
| 2 |
aloraine |
218 |
<file name="https://hgdownload.soe.ucsc.edu/goldenPath/mm10/bigZips/mm10.2bit" |
| 3 |
|
|
title="Mus musculus (Dec 2011) mouse (GRCm38/mm10)" |
| 4 |
|
|
reference="true" |
| 5 |
|
|
/> |
| 6 |
aloraine |
39 |
<file name="M_musculus_Dec_2011_refGene.bed.gz" |
| 7 |
|
|
title="RefGene" |
| 8 |
|
|
description="UCSC RefGene track (Nov 26, 2013)" |
| 9 |
|
|
url="http://genome.ucsc.edu" |
| 10 |
|
|
foreground="000000" |
| 11 |
|
|
name_size="14" |
| 12 |
|
|
direction_type="arrow" |
| 13 |
|
|
label_field="title" |
| 14 |
|
|
background="FFFFFF" |
| 15 |
|
|
load_hint="Whole Sequence" |
| 16 |
|
|
show2tracks="true" |
| 17 |
|
|
/> |
| 18 |
|
|
<file name="M_musculus_Dec_2011_all_mrna.psl.gz" |
| 19 |
|
|
title="mRNA" |
| 20 |
|
|
description="UCSC all mRNA track (Mar 28, 20132)" |
| 21 |
|
|
url="http://genome.ucsc.edu" |
| 22 |
|
|
max_depth="10" |
| 23 |
|
|
background="FFFFFF" |
| 24 |
|
|
foreground="B71725" |
| 25 |
|
|
name_size="16" |
| 26 |
|
|
label_field="id" |
| 27 |
|
|
show2tracks="false"/> |
| 28 |
|
|
<file name="M_musculus_Dec_2011_all_est.psl.gz" |
| 29 |
|
|
title="EST" |
| 30 |
|
|
description="UCSC all EST track (Oct. 22, 2012)" |
| 31 |
|
|
url="http://genome.ucsc.edu" |
| 32 |
|
|
direction_type="arrow" |
| 33 |
|
|
max_depth="10" |
| 34 |
|
|
name_size="16" |
| 35 |
|
|
background="FFFFFF" |
| 36 |
|
|
foreground="B71725" |
| 37 |
|
|
label_field="id" |
| 38 |
|
|
show2tracks="false"/> |
| 39 |
nfreese |
160 |
<file name="mm10-blacklist.v2.bed.gz" |
| 40 |
|
|
title="ENCODE blacklist" |
| 41 |
|
|
description="ENCODE-identified problematic regions of the genome (mm10-blacklist.v2.bed.gz)" |
| 42 |
|
|
url="https://github.com/Boyle-Lab/Blacklist" |
| 43 |
|
|
direction_type="none" |
| 44 |
|
|
name_size="12" |
| 45 |
|
|
background="FFFFFF" |
| 46 |
|
|
foreground="000000" |
| 47 |
|
|
label_field="name" |
| 48 |
|
|
show2tracks="false"/> |
| 49 |
aloraine |
39 |
</files> |
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