/[genomes]/quickload/M_musculus_Dec_2011/annots.xml
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Contents of /quickload/M_musculus_Dec_2011/annots.xml

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Revision 160 - (show annotations)
Wed Sep 22 20:49:05 2021 UTC (2 months ago) by nfreese
File MIME type: text/xml
File size: 1458 byte(s)
IGBF-2696;Add mm10 ENCODE blacklist v2;Sep 22, 2021
1 <files>
2 <file name="M_musculus_Dec_2011_refGene.bed.gz"
3 title="RefGene"
4 description="UCSC RefGene track (Nov 26, 2013)"
5 url="http://genome.ucsc.edu"
6 foreground="000000"
7 name_size="14"
8 direction_type="arrow"
9 label_field="title"
10 background="FFFFFF"
11 load_hint="Whole Sequence"
12 show2tracks="true"
13 />
14 <file name="M_musculus_Dec_2011_all_mrna.psl.gz"
15 title="mRNA"
16 description="UCSC all mRNA track (Mar 28, 20132)"
17 url="http://genome.ucsc.edu"
18 max_depth="10"
19 background="FFFFFF"
20 foreground="B71725"
21 name_size="16"
22 label_field="id"
23 show2tracks="false"/>
24 <file name="M_musculus_Dec_2011_all_est.psl.gz"
25 title="EST"
26 description="UCSC all EST track (Oct. 22, 2012)"
27 url="http://genome.ucsc.edu"
28 direction_type="arrow"
29 max_depth="10"
30 name_size="16"
31 background="FFFFFF"
32 foreground="B71725"
33 label_field="id"
34 show2tracks="false"/>
35 <file name="mm10-blacklist.v2.bed.gz"
36 title="ENCODE blacklist"
37 description="ENCODE-identified problematic regions of the genome (mm10-blacklist.v2.bed.gz)"
38 url="https://github.com/Boyle-Lab/Blacklist"
39 direction_type="none"
40 name_size="12"
41 background="FFFFFF"
42 foreground="000000"
43 label_field="name"
44 show2tracks="false"/>
45 </files>

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