/[genomes]/quickload/M_musculus_Jul_2007/HEADER.md
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revision 39 by aloraine, Thu Sep 27 14:59:57 2018 UTC revision 79 by aloraine, Sat Oct 27 01:34:05 2018 UTC
# Line 6  The files listed below are formatted for Line 6  The files listed below are formatted for
6  Browser, available from <a href="https://bioviz.org">BioViz.org</a>.  Browser, available from <a href="https://bioviz.org">BioViz.org</a>.
7  </p>  </p>
8  <p>  <p>
9  Annotation (bed) and alignment (psl) files were downloaded from the UCSC Genome  Annotation (bed) and alignment (psl) files (if available) were downloaded from the UCSC Genome
10  Bioinformatics Table Browser. Each file is named for its corresponding table in the  Bioinformatics Table Browser. Each file is named for its corresponding table in the
11  UCSC Genome database. See the <a href="annots.xml">annots.xml</a> meta-data file in  UCSC Genome database. See the <a href="annots.xml">annots.xml</a> meta-data file in
12  this directory for details.  this directory for details.
13  </p>  </p>
14  <p>  <p>
15  Files with extension .gz were compressed and indexed using bgzip and  Files with extension .gz were compressed and indexed using bgzip and
16  tabix tools from <a href="https://www.htslib.org>htslib.org</a>.  tabix tools from <a href="https://www.htslib.org">htslib.org</a>.
17  </p>  </p>
18  <p>  <p>
19  The file named M_musculus_Jul_2007.2bit contains sequence data and was downloaded from the UCSC Genome  The file named M_musculus_Jul_2007.2bit contains sequence data and was downloaded from the UCSC Genome
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