/[genomes]/quickload/R_norvegicus_Nov_2020/annots.xml
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Annotation of /quickload/R_norvegicus_Nov_2020/annots.xml

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Revision 223 - (hide annotations)
Fri Mar 7 03:09:45 2025 UTC (5 days, 17 hours ago) by aloraine
File MIME type: text/xml
File size: 1666 byte(s)
IGBF-4030 Load sequence from UCSC bigzip urls for: bee, chicken, mouse 2020, rat 2020
1 nfreese 176 <files>
2 aloraine 223 <file name="https://hgdownload.soe.ucsc.edu/goldenPath/rn7/bigZips/rn7.2bit"
3     title="Rattus norvegicus (Nov 2020) rat (mRatBN7.2/rn7)"
4     reference="true"
5     />
6 nfreese 176 <file name="R_norvegicus_Nov_2020_refGene.bed.gz"
7     title="RefGene"
8     description="UCSC RefGene track (downloaded Jun 27, 2023)"
9     url="R_norvegicus_Nov_2020"
10     foreground="000000"
11     name_size="14"
12     direction_type="arrow"
13     label_field="title"
14     background="FFFFFF"
15     load_hint="Whole Sequence"
16     show2tracks="true"
17     />
18     <file name="R_norvegicus_Nov_2020_ncbiRefSeq.bed.gz"
19     title="NCBI RefSeq"
20     description="UCSC RefSeq All track (downloaded Jun 27, 2023)"
21     url="R_norvegicus_Nov_2020"
22     direction_type="arrow"
23     name_size="12"
24     background="FFFFFF"
25     foreground="B71725"
26     label_field="title"
27     show2tracks="true"
28     />
29     <file name="R_norvegicus_Nov_2020_all_mrna.psl.gz"
30     title="mRNA"
31     description="UCSC all mRNA track (downloaded Jun 27, 2023)"
32     url="R_norvegicus_Nov_2020"
33     direction_type="arrow"
34     max_depth="10"
35     background="FFFFFF"
36     foreground="B71725"
37     name_size="16"
38     label_field="id"
39     show2tracks="true"
40     />
41     <file name="R_norvegicus_Nov_2020_all_est.psl.gz"
42     title="EST"
43     description="UCSC all EST track (downloaded Jun 27, 2023)"
44     url="R_norvegicus_Nov_2020"
45     direction_type="arrow"
46     max_depth="10"
47     name_size="16"
48     background="FFFFFF"
49     foreground="B71725"
50     label_field="id"
51     show2tracks="true"
52     />
53     </files>

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