--- quickload/X_tropicalis_Nov_2009/HEADER.md 2018/10/27 01:44:05 80 +++ quickload/X_tropicalis_Jul_2016/HEADER.md 2020/02/16 03:49:40 115 @@ -1,6 +1,6 @@ -

JGI4.2/xenTro3 Xenopus tropicalis genome, Nov 2009 genome assembly

+

JGI9.1/xenTro9 Xenopus tropicalis genome, Jul 2016 genome assembly

The files listed below are formatted for visualization in the Integrated Genome Browser, available from BioViz.org. @@ -16,10 +16,10 @@ tabix tools from htslib.org.

-The file named X_tropicalis_Nov_2009.2bit contains sequence data and is from the UCSC Genome +The file named X_tropicalis_Jul_2016.2bit contains sequence data and is from the UCSC Genome Bioinformatics Web site. To convert a .2bit to fasta, use twoBitToFa. The file genome.txt lists sequences and their sizes and was made from -X_tropicalis_Nov_2009.2bit sequence file using twoBitInfo. +X_tropicalis_Jul_2016.2bit sequence file using twoBitInfo.

Both twoBitInfo and twoBitToFa are