/[genomes]/quickload/species.txt
ViewVC logotype

Contents of /quickload/species.txt

Parent Directory Parent Directory | Revision Log Revision Log


Revision 233 - (show annotations)
Fri Jan 30 01:34:13 2026 UTC (33 hours, 50 minutes ago) by aloraine
File MIME type: text/plain
File size: 11226 byte(s)
IGBF-4386 Add Euphorbia lathyris genome to IGB Quickload
1 Aedes albopictus Asian tiger mosquito A_albopictus
2 Ailuropoda melanoleuca Giant panda A_melanoleuca ailMel Ailuropoda_melanoleuca
3 Alligator mississippiensis American alligator A_mississippiensis allMis
4 Anguilla rostrata American eel A_rostrata
5 Anolis carolinensis Anole lizard A_carolinensis anoCar Anolis_carolinensis
6 Anopheles gambiae Mosquito A_gambiae anoGam
7 Apis mellifera European honey bee A_mellifera apiMel
8 Aplysia californica California sea hare A_californica aplCal
9 Apteryx australis Brown kiwi A_australis aptMan
10 Aquila chrysaetos canadensis Golden eagle A_chrysaetos_canadensis aquChr
11 Aquilegia coerulea Colorado blue columbine A_coerulea
12 Arabidopsis lyrata Lyrate rockcress A_lyrata
13 Arabidopsis thaliana Mouse-ear cress A_thaliana araTha
14 Arbacia punctulata Purple-spined sea urchin A_punctulata
15 Balaenoptera acutorostrata Minke whale B_acutorostrata balAcu
16 Bison bison bison Bison B_bison_bison bisBis
17 Bos taurus Cow B_taurus bosTau Bos_taurus
18 Brachypodium distachyon Purple false brome B_distachyon
19 Branchiostoma floridae Lancet B_floridae braFlo
20 Brassica rapa Field mustard B_rapa
21 Caenorhabditis brenneri C. brenneri (nematode) C_brenneri caePb
22 Caenorhabditis briggsae C. briggsae (nematode) C_briggsae cb
23 Caenorhabditis elegans C. elegans (nematode) C_elegans ce Caenorhabditis_elegans
24 Caenorhabditis japonica C. japonica (nematode) C_japonica caeJap
25 Caenorhabditis remanei C. remanei (nematode) C_remanei caeRem
26 Callithrix jacchus Common marmoset C_jacchus calJac Callithrix_jacchus
27 Callorhinchus milii Elephant shark C_milii calMil
28 Camelina sativa DH55 False flax C_sativa_DH55
29 Candida albicans SC Yeast (Human Flora) SC C_albicans_SC5314
30 Candida albicans WO Yeast (Human Flora) WO C_albicans_WO-1
31 Canis lupus familiaris Dog C_familiaris canFam Canis_familiaris
32 Cannabis sativa CBDRx Cannabis sativa CBDRx C_sativa_CBDRx
33 Capitella teleta Capitella teleta C_teleta
34 Capsella rubella Red shepherd's purse C_rubella
35 Carica papaya Papaya C_papaya
36 Cavia porcellus Guinea pig C_porcellus cavPor Cavia_porcellus
37 Ceratotherium simum White rhinoceros C_simum cerSim
38 Chlamydomonas reinhardtii motile single-celled green alga C_reinhardtii
39 Chlorocebus sabaeus African green monkey C_sabaeus chlSab
40 Choloepus hoffmanni Two-toed sloth C_hoffmanni choHof Choloepus_hoffmanni
41 Chrysemys picta Painted turtle C_picta Chrysemys_picta chrPic
42 Citrus clementina Clementine mandarin C_clementina
43 Citrus sinensis Sweet orange C_sinensis
44 Ciona intestinalis Vase tunicate (sea squirt) C_intestinalis ci Ciona_intestinalis
45 Ciona savignyi Pacific sea squirt C_savignyi Ciona_savignyi C. savignyi
46 Cricetulus griseus Chinese hamster C_griseus criGri criGriChoV
47 Cucumis sativus Cucumber C_sativus
48 Dama dama Fallow deer D_dama
49 Danio rerio Zebrafish D_rerio danRer Danio_rerio
50 Daphnia magna water flea D_magna
51 Daphnia pulex water flea D_pulex
52 Dasypus novemcinctus Nine-banded armadillo D_novemcinctus dasNov Dasypus_novemcinctus
53 Dictyostelium discoideum slime mold D_discoideum
54 Drosophila ananassae D. ananassae (fruit fly) D_ananassae droAna
55 Drosophila erecta D. erecta (fruit fly) D_erecta droEre
56 Drosophila grimshawi D. grimshawi (fruit fly) D_grimshawi droGri
57 Drosophila melanogaster Vinegar (fruit) fly D_melanogaster dm Drosophila_melanogaster
58 Drosophila mojavensis D. mojavensis (fruit fly) D_mojavensis droMoj
59 Drosophila persimilis D. persimilis (fruit fly) D_persimilis droPer
60 Drosophila pseudoobscura D. pseudoobscura (fruit fly) D_pseudoobscura dp
61 Drosophila sechellia D. sechelia (fruit fly) D_sechellia droSec
62 Drosophila simulans D. simulans (fruit fly) D_simulans droSim
63 Drosophila virilis D. virilis (fruit fly) D_virilis droVir
64 Drosophila yakuba D. yakuba (fruit fly) D_yakuba droYak
65 Dipodomys ordii Kangaroo rat D_ordii dipOrd Dipodomys_ordii
66 Ebola virus Ebola virus E_virus eboVir
67 Echinops telfairi Lesser hedgehog tenrec E_telfairi Echinops_telfairi echTel
68 Enhydra lutris nereis Southern sea otter E_lutris_nereis enhLutNer
69 Equus caballus Horse E_caballus equCab Equus_caballus
70 Erinaceus europaeus European hedgehog E_europaeus eriEur Erinaceus_europaeus
71 Escherichia coli K12-MG1655 E. coli K12-MG1655 E_coli_K12-MG1655
72 Euprymna scolopes Hawaiian bobtail squid E_scolopes
73 Eucalyptus grandis Eucalyptus E_grandis
74 Euphorbia lathyris Caper spurge E_lathyris
75 Felis catus Cat F_catus felCat Felis_catus
76 Ficedula albicollis Collared flycatcher F_albicollis
77 Fragaria vesca Woodland strawberry F_vesca
78 Galeopterus variegatus Malayan flying lemur G_variegatus galVar
79 Gallus gallus Chicken G_gallus galGal Gallus_gallus
80 Gasterosteus aculeatus Stickleback G_aculeatus gasAcu Gasterosteus_aculeatus
81 Geospiza fortis Medium ground finch G_fortis geoFor
82 Glycine max Soybean G_max
83 Gorilla gorilla Western gorilla G_gorilla gorGor Gorilla_gorilla
84 Gadus morhua Atlantic cod G_morhua gadMor
85 Gossypium hirsutum Upland cotton G_hirsutum
86 Gossypium raimondii Cotton D G_raimondii
87 Heterocephalus glaber Naked mole rat H_glaber hetGla
88 Homo sapiens Human H_sapiens hg Homo_sapiens
89 Homo sapiens T2T Human Telomere to Telomere H_sapiens_T2T hs
90 Hydra vulgaris Swiftwater hydra H_vulgaris
91 Hypsibius exemplaris Z151 Tardigrade water bear H_exemplaris_Z151
92 Hordeum vulgare Barley H_vulgare
93 Latimeria chalumnae Coelacanth L_chalumnae latCha
94 Lemna gibba Gibbous duckweed L_gibba
95 Linum usitatissimum flax L_usitatissimum
96 Loligo pealeii Longfin inshore squid L_pealeii
97 Loxodonta africana African bush elephant L_africana loxAfr Loxodonta_africana
98 Lotus japonicus a model legume L_japonicus
99 Lotmaria passim honeybee parasite L_passim
100 Macaca fascicularis Crab-eating macaque M_fascicularis macFas
101 Macaca mulatta Rhesus monkey M_mulatta rheMac Macaca_mulatta
102 Macropus eugenii Tammar wallaby M_eugenii Macropus_eugenii macEug
103 Malus domestica Borkh Apple M_domestica_Borkh
104 Manihot esculenta Cassava M_esculenta
105 Manis pentadactyla Chinese pangolin M_pentadactyla manPen
106 Medicago truncatula Barrel medic M_truncatula
107 Meleagris gallopavo Turkey M_gallopavo Meleagris_gallopavo melGal
108 Melopsittacus undulatus Budgie M_undulatus melUnd
109 Microcebus murinus Gray mouse lemur M_murinus micMur Microcebus_murinus
110 Mimulus guttatus Monkey flower M_guttatus
111 Monkeypox virus monkeypox M_virus mpxvRivers
112 Monodelphis domestica Opossum M_domestica_metatherian monDom
113 Monosiga brevicollis Choanoflagellates M_brevicollis
114 Mus musculus House mouse M_musculus mm Mus_musculus
115 Musa acuminata DH Pahang banana M_acuminata_DH_Pahang
116 Mustela putorius furo Domesticated ferret M_putorius musFur
117 Mycobacterium abscessus M. abcessus M_abscessus
118 Mycobacterium smegmatis M. smegmatis M_smegmatis
119 Mycobacterium tuberculosis M. tuberculosis M_tuberculosis
120 Myotis lucifugus Little brown bat M_lucifugus Myotis_lucifugus myoLuc
121 Nasalis larvatus Proboscis monkey N_larvatus nasLar
122 Nanorana parkeri Tibetan frog N_parkeri nanPar
123 Nematostella vectensis Starlet sea anemone N_vectensis
124 Neomonachus schauinslandi Hawaiian monk seal N_schauinslandi neoSch
125 Nicotiana tabacum Tobacco N_tabacum
126 Nomascus leucogenys Northern white-cheeked gibbon N_leucogenys nomLeu
127 Ochotona princeps American pika O_princeps ochPri Ochotona_princeps
128 Oreochromis niloticus Nile tilapia O_niloticus oreNil
129 Ornithorhynchus anatinus Platypus O_anatinus ornAna Ornithorhynchus_anatinus
130 Oryctolagus cuniculus European rabbit O_cuniculus Oryctolagus_cuniculus oryCun
131 Oryza sativa indica Rice (indica) O_sativa_indica
132 Oryza sativa japonica Rice (japonica) O_sativa O_sativa_japonica
133 Oryzias latipes Japanese medaka O_latipes oryLat Oryzias_latipes oryzias_latipes
134 Otolemur garnettii Northern greater galago O_garnettii otoGar Otolemur_garnettii
135 Ostreococcus lucimarinus Plankton O_lucimarinus
136 Ovis aries Sheep O_aries OAR oviAri
137 Pan paniscus Bonobo P_paniscus panPan
138 Pan troglodytes Chimp P_troglodytes panTro Pan_troglodytes
139 Panicum virgatum Switchgrass P_virgatum
140 Papio anubis Olive baboon P_anubis papAnu
141 Papio hamadryas Hamadryas baboon P_hamadryas papHam
142 Petromyzon marinus Lamprey P_marinus petMar
143 Phaseolus vulgaris Common bean P_vulgaris
144 Physcomitrella patens Moss P_patens
145 Pinus taeda Loblolly Pine P_taeda
146 Plasmodium falciparum Malaria parasite P_falciparum Pfalciparum_3D7_plasmoDB-5.4 Pfalciparum_3D7_plasmoDB-5.5
147 Pongo pygmaeus abelii Orangutan P_abelii ponAbe Pongo_pygmaeus
148 Populus trichocarpa Black cottonwood P_trichocarpa
149 Pristionchus pacificus P. pacificus (nematode) P_pacificus priPac
150 Procavia capensis Rock hyrax P_capensis proCap Procavia_capensis
151 Pseudomonas aeruginosa P. aeruginosa P_aeruginosa
152 Pteropus vampyrus Large flying fox P_vampyrus pteVam Pteropus_vampyrus
153 Prunus persica Peach P_persica
154 Ramazzottius varieornatus YOKOZUNA-1 Tardigrade R_varieornatus_YOKOZUNA-1
155 Rattus norvegicus Rat R_norvegicus rn Rattus_norvegicus
156 Rhinopithecus roxellana Golden snub-nosed monkey R_roxellana rhiRox
157 Ricinus communis Castor oil plant R_communis
158 Saccharomyces cerevisiae Budding Yeast S_cerevisiae sacCer Saccharomyces_cerevisiae
159 Saimiri boliviensis Squirrel monkey S_boliviensis saiBol
160 Sarcophilus harrisii Tasmanian devil S_harrisii sarHar
161 SARS-CoV-2 virus SARS-CoV-2 S_virus wuhCor
162 Schizosaccharomyces pombe Fission Yeast S_pombe
163 Selaginella moellendorffii Spikemoss S_moellendorffii
164 Setaria italica Foxtail millet S_italica
165 Sigmodon hispidus Cotton rat S_hispidus
166 Simmondsia chinensis Jojoba S_chinensis
167 Sodalis glossinidius Tsetse fly endosymbiont S_glossinidius
168 Solanum lycopersicum Tomato S_lycopersicum
169 Solanum tuberosum Phureja Potato S_tuberosum_DM
170 Sorex araneus Eurasian shrew S_araneus sorAra Sorex_araneus
171 Sorghum bicolor Sorghum S_bicolor
172 Spermophilus tridecemlineatus Thirteen-lined ground squirrel S_tridecemlineatus speTri Spermophilus_tridecemlineatus
173 Strongylocentrotus purpuratus Purple sea urchin S_purpuratus strPur
174 Sus scrofa Wild boar S_scrofa Sus_scrofa susScr
175 Taeniopygia guttata Zebra finch T_guttata taeGut Taeniopygia_guttata
176 Takifugu rubripes Fugu T_rubripes fr Takifugu_rubripes
177 Tarsius syrichta Philippine tarsier T_syrichta tarSyr Tarsius_syrichta
178 Tetraodon nigroviridis Tetraodon T_nigroviridis tetNig Tetraodon_nigroviridis
179 Thamnophis sirtalis Garter snake T_sirtalis thaSir
180 Thellungiella halophila Salt cress T_halophila
181 Thellungiella parvula Anatolian cress T_parvula
182 Thermococcus kodakaraensis KOD1 Hyperthermophilic Archaeon T_kodakaraensis_KOD1 T. kodakaraensis_KOD1 T_kodakaraensis_KOD
183 Tribolium castaneum Red flour beetle T_castaneum
184 Trichechus manatus latirostris West Indian manatee T_manatus triMan
185 Triticum aestivum Common wheat T_aestivum
186 Trypanosoma brucei Protozoan parasites T_brucei
187 Tupaia belangeri Northern tree shrew T_belangeri tupBel Tupaia_belangeri
188 Tursiops truncatus Bottlenose dolphin T_truncatus turTru Tursiops_truncatus
189 Vaccinium corymbosum Blueberry V_corymbosum
190 Vanessa cardui Painted lady V_cardui
191 Vicugna pacos Alpaca V_pacos vicPac Vicugna_pacos
192 Vitis vinifera Grape vine V_vinifera
193 Volvox carteri Volvox V_carteri
194 Xenopus laevis African clawed frog X_laevis xenLae
195 Xenopus tropicalis Pipid frog X_tropicalis xenTro Xenopus_tropicalis
196 Yersinia pestis Bubonic plague pathogen Y_pestis
197 Yersinia pseudotuberculosis Y. pseudotuberculosis Y_pseudotuberculosis
198 Yarrowia lipolytica CLIB122 CLIB122 Y_lipolytica_CLIB
199 Yarrowia lipolytica PO1f PO1f Y_lipolytica_PO
200 Yarrowia lipolytica WSH-Z06 WSHZ06 Y_lipolytica_WSH
201 Zea mays B73 Maize B73 Z_mays_B73

  ViewVC Help
Powered by ViewVC 1.1.26