/[genomes]/quickload/synonyms.txt
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Tue Jul 22 15:23:31 2025 UTC (3 weeks, 2 days ago) by pkulzer
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IGBF-4266: Synchronize species.txt and synonyms.txt between IGB and SVN
1 pkulzer 230 A_albopictus_Jan_2024 AalbF5
2     A_australis_Jun_2015 aptMan1
3     A_californica_Sep_2008 aplCal1
4     A_carolinensis_Feb_2007 anoCar1 Anolis_carolinensis.AnoCar1.0.reference
5     A_carolinensis_May_2010 anoCar2 AnoCar2.0
6     A_chrysaetos_canadensis_Oct_2014 aquChr2
7     A_gambiae_Oct_2006 anoGam3
8     A_gambiae_Feb_2003 anoGam1 Anopheles_Feb_2003 Ag ag ag:Feb_2003 Ag:Feb_2003 MOZ2
9     A_lyrata_Apr_2011 Arabidopsis_lyrata_JGI_v1.0
10     A_melanoleuca_Dec_2009 ailMel1 Ailuropoda_melanoleuca.ailMel1.reference Shenzhen 1.0
11     A_mellifera_Jan_2005 apiMel2
12     A_mellifera_Jul_2004 apiMel1
13     A_mississippiensis_Aug_2012 allMis1
14     A_thaliana_Apr_2008 TAIR8 tair8 Tair8 A_thaliana_TAIR8
15     A_thaliana_Jan_2004 At:NCBIv5 At:NCBI5 at.NCBIv5 at5 NCBIv5 TIGRv5 at:TIGRv5 At:TIGRv5 at:Jan_2004 At:Jan_2004 TAIR7 tair7 Tair7 A_thaliana_TAIR7
16     A_thaliana_Jun_2009 TAIR9 tair9 Tair9 Arabidopsis_thaliana_TAIR10 TAIR10 Arabidopsis_thaliana_TAIR9 araTha1
17     B_floridae_Mar_2006 braFlo1 JGI 1.0
18     B_acutorostrata_Oct_2013 balAcu1
19     B_bison_bison_Oct_2014 bisBis1
20     B_taurus_Aug_2006 bosTau3 Cow_Aug_2006
21     B_taurus_Mar_2005 bosTau2 Cow_Mar_2005
22     B_taurus_Oct_2007 bosTau4 Cow_Oct_2007 Bos_taurus.Btau_4.0.reference
23     B_taurus_Nov_2009 bosTau6 Cow_Nov_2009
24     B_taurus_Oct_2011 bosTau7 Btau_4.6.1
25     B_taurus_Apr_2018 bosTau9
26     C_brenneri_Feb_2008 caePb2 WUGSC 6.0.1
27     C_brenneri_Jan_2007 caePb1
28     C_briggsae_Aug_2005 cb2
29     C_briggsae_Jan_2007 cb3
30     C_briggsae_Jul_2002 cb1
31     C_elegans_Aug_2004 http://www.wormbase.org/genome/C_elegans/WS130 http://www.wormbase.org/genome/C_elegans/WS130/
32     C_elegans_Aug_2007 ce5
33     C_elegans_Jan_2007 C_Elegans_January_2007 ceJan2007 ce4 ce:Jan_2007 Ce:Jan_2007 WS170
34     C_elegans_Feb_2009 ce7 Caenorhabditis_elegans.WS200.reference
35     C_elegans_Jun_2009 ce8 Caenorhabditis_elegans.WS204.reference
36     C_elegans_Mar_2004 C_Elegans_March_2004 ceMar2004 ce2 ce:Mar_2004 Ce:Mar_2004 WS120
37     C_elegans_Mar_2005 ce3
38     C_elegans_May_2003 C_Elegans_May_2003 ceMay2003 ce1 ce:May_2003 Ce:May_2003
39     C_elegans_May_2008 C_Elegans_May_2008 ceMay2008 ce6 ce:May_2008 Ce:May_2008 WS190
40     C_elegans_Oct_2010 ce10 WS220
41     C_elegans_Feb_2013 ce11
42     C_familiaris_Jul_2003 canFam1
43     C_familiaris_May_2005 canFam2 Dog_May_2005 Canis_familiaris.BROADD2.reference
44     C_familiaris_Sep_2011 canFam3 CanFam3.1
45     C_familiaris_Mar_2020 canFam4
46     C_familiaris_May_2019 canFam5
47     C_griseus_Jun_2017 criGriChoV2
48     C_griseus_Aug_2011 criGriChoV1
49     C_griseus_Jul_2013 criGri1
50     C_hoffmanni_Jul_2008 choHof1
51     C_hoffmanni_Sep_2008 Choloepus_hoffmanni.choHof1.reference
52     C_intestinalis_Dec_2002 ci1 Ciona_intestinalis.JGI1.reference
53     C_intestinalis_Mar_2005 ci2 Ciona_intestinalis.JGI2.reference
54     C_intestinalis_Apr_2011 ci3
55     C_jacchus_Jun_2007 calJac1
56     C_jacchus_Mar_2009 calJac3 Callithrix_jacchus.calJac3.reference WUGSC 3.2
57     C_jacchus_May_2020 calJac4
58     C_japonica_Jan_2009 caeJap2
59     C_japonica_Mar_2008 caeJap1 WUGSC 3.0.2
60     C_milii_Dec_2013 calMil1
61     C_porcellus_Feb_2008 cavPor3 Cavia_porcellus.cavPor3.reference
62     C_picta_Dec_2011 chrPic1
63     C_remanei_Mar_2005 caeRem1
64     C_remanei_Mar_2006 caeRem2
65     C_remanei_May_2007 caeRem3 WUGSC 15.0.1
66     C_sabaeus_Mar_2014 chlSab2
67     C_savignyi_Jul_2005 cioSav2 Ciona_savignyi.CSAV2.reference Ciona_savignyi.CSAV2.0.reference
68     C_savignyi_Apr_2003 cioSav1
69     C_simum_May_2012 cerSim1
70     C_teleta_Jan_2013 Capca1
71     D_ananassae_Aug_2005 droAna2
72     D_ananassae_Jul_2004 droAna1
73     D_dama_Nov_2023 ASM3311817v1
74     D_erecta_Aug_2005 droEre1
75     D_grimshawi_Aug_2005 droGri1
76 aloraine 108 D_magna_Apr_2010 Daphnia magna Xinb3 v2.4
77     D_magna_Jan_2019 Daphnia magna SK v1.0
78 pkulzer 230 D_melanogaster_Aug_2014 dm6
79     D_melanogaster_Apr_2004 Drosophila_Apr_2004 BDGP Release 4 dm2 dm:Apr_2004 Dm:Apr_2004 Dm:R4 Dm:BDGPv4 Dm;BDGPv4 Dm:BDGPv4h Dm;BDGPv4h
80     D_melanogaster_Apr_2006 Drosophila_Apr_2006 BDGP Release 5 dm3 dm:Apr_2006 Dm:Apr_2006 Dm:R5 Dm:BDGPv5 Dm;BDGPv5 Dm:BDGPv5h Dm;BDGPv5h
81     D_melanogaster_Jan_2003 Drosophila_Jan_2003 Drosophila jan2003 dm1 dm:Jan_2003 Dm:Jan_2003 Dm:R3 Dm:BDGPv3 Dm;BDGPv3
82     D_mojavensis_Aug_2004 droMoj1
83     D_mojavensis_Aug_2005 droMoj2
84     D_novemcinctus_Jul_2008 dasNov2 Dasypus_novemcinctus.dasNov2.reference
85     D_novemcinctus_Dec_2011 dasNov3
86     D_ordii_Jul_2008 dipOrd1 Dipodomys_ordii.dipOrd1.reference
87     D_persimilis_Oct_2005 droPer1
88     D_pseudoobscura_Nov_2004 dp3
89     D_pseudoobscura_Aug_2003 dp2
90 aloraine 108 D_pulex_Feb_2011 Daphnia pulex TCO v1.0
91     D_pulex_Sep_2016 Daphnia pulex PA42 v3.0
92 pkulzer 230 D_rerio_May_2017 danRer11
93     D_rerio_Sep_2014 danRer10
94     D_rerio_Jul_2010 danRer7
95     D_rerio_Dec_2008 danRer6 Zv8 Zebrafish_Dec_2008 Danio_rerio.Zv8.reference
96     D_rerio_Jul_2007 danRer5 Zv7 Zebrafish_Jul_2007
97     D_rerio_Mar_2006 danRer4 Zv6 Zebrafish_Mar_2006
98     D_rerio_May_2005 danRer3 Zv5 Zebrafish_May_2005
99     D_sechellia_Oct_2005 droSec1
100     D_simulans_Apr_2005 droSim1
101     D_virilis_Aug_2005 droVir2
102     D_virilis_Jul_2004 droVir1
103     D_yakuba_Apr_2004 droYak1
104     D_yakuba_Nov_2005 droYak2
105     E_virus_Jun_2014 eboVir3
106     E_caballus_Jan_2007 equCab1
107     E_caballus_Sep_2007 equCab2 Equus_caballus.EquCab2.reference
108     E_caballus_Jan_2018 equCab3
109     E_coli_K12-MG1655_Jan_2012 E_coli_K12_Jan_2012 E. coli eschColi_K12
110     E_europaeus_Jun_2006 eriEur1
111     E_europaeus_May_2012 eriEur2
112     E_lutris_nereis_Jun_2019 enhLutNer1
113     E_telfairi_Jul_2005 echTel1
114     E_telfairi_Nov_2012 echTel2
115     F_catus_Mar_2006 felCat3
116     F_catus_Dec_2008 felCat4 felCatV17e
117     F_catus_Sep_2011 felCat5
118     F_catus_Nov_2014 felCat8
119     F_catus_Nov_2017 felCat9
120     F_vesca_Sep_2011 Fragaria_vesca_JGI_v1.1
121     G_aculeatus_Feb_2006 gasAcu1 Gasterosteus_aculeatus.BROADS1.reference
122     G_fortis_Apr_2012 geoFor1 GeoFor_1.0
123     G_gallus_Mar_2018 galGal6
124     G_gallus_Dec_2015 galGal5
125     G_gallus_Nov_2011 galGal4 Gallus_gallus-4.0
126     G_gallus_Feb_2004 galGal2
127     G_gallus_May_2006 galGal3 Chicken_May_2006 Gallus_gallus.WASHUC2.reference
128     G_gorilla_Aug_2019 gorGor6
129     G_gorilla_Mar_2016 gorGor5
130     G_gorilla_Dec_2014 gorGor4
131     G_gorilla_May_2011 gorGor3 Gorilla_gorilla.gorGor3.reference gorGor3.1
132     G_gorilla_Aug_2009 gorGor2
133     G_gorilla_Oct_2008 gorGor1
134     G_max_Dec_2008 Glyma1 Soybean_Dec_2008 JGI_Soybean_v101
135     G_morhua_May_2010 gadMor1
136     G_variegatus_Jun_2014 galVar1
137 aloraine 181 H_exemplaris_Z151_Apr_2017 nHd_3.1
138 pkulzer 230 H_glaber_Jul_2011 hetGla1 BGI HetGla_1.0
139     H_glaber_Jan_2012 hetGla2
140     H_sapiens_Apr_2001 Human_Apr_2001 Human 1apr2002 Human_1apr2001 Chr_21_22 ABC Human hg7 hs:Apr_2001 Hs:Apr_2001
141     H_sapiens_Apr_2003 H_sapiens_Apr_2003_Encode Human_Apr_2003 Human 10apr2003 Human_10apr2003 hs.NCBIv33 hg15 human_ncbi33 ncbi.v33 Human_Apr_2003_Encode hs:Apr_2003 Hs:Apr_2003 hs:NCBIv33 Hs:NCBIv33 Hs;NCBIv33 Hs:NCBI33
142     H_sapiens_Dec_2001 Human_Dec_2001 Human 22dec2001 Human_22dec2001 hs.NCBIv28 hg10 human_ncbi28 ncbi.v28 hs:Dec_2001 Hs:Dec_2001 hs:NCBIv28 Hs:NCBIv28 Hs;NCBIv28 Hs:NCBI28
143     H_sapiens_Feb_2009 Human_Feb_2009 hs.NCBIv37 hg19 human_ncbi37 ncbi.v37 hs:Feb_2009 Hs:Feb_2009 hs:NCBIv37 Hs:NCBIv37 chado/chado-Hsa-19 human/19 Hs;NCBIv37 Hs:NCBI37 GRCh37 Hs:GRCh37 Homo_sapiens.GRCh37.reference
144     H_sapiens_Dec_2013 Human_Dec_2013 hs.NCBIv38 hg38 human_ncbi38 ncbi.v38 hs:Dec_2013 Hs:Dec_2013 hs:NCBIv38 Hs:NCBIv38 chado/chado-Hsa-38 human/38 Hs;NCBIv38 Hs:NCBI38 GRCh38 Hs:GRCh38 Homo_sapiens.GRCh38.reference grcH38P12 GRCh38.p12
145     H_sapiens_T2T_Jan_2022 hs1 T2T-CHM13 v2.0/hs1
146     H_sapiens_Jul_2003 http://www.ncbi.nlm.nih.gov/genome/H_sapiens/B34.1 http://www.ncbi.nlm.nih.gov/genome/H_sapiens/B34.1/
147     H_sapiens_Jul_2003 http://www.ncbi.nlm.nih.gov/genome/H_sapiens/B34.2 http://www.ncbi.nlm.nih.gov/genome/H_sapiens/B34.2/
148     H_sapiens_Jul_2003 http://www.ncbi.nlm.nih.gov/genome/H_sapiens/B34.3 http://www.ncbi.nlm.nih.gov/genome/H_sapiens/B34.3/
149     H_sapiens_Jul_2003 Human_Jul_2003 hs.NCBIv34 hg16 human_ncbi34 ncbi.v34 hs:Jul_2003 Hs:Jul_2003 hs:NCBIv34 Hs:NCBIv34 human/16 Hs;NCBIv34 Hs:NCBI34
150     H_sapiens_Jun_2002 H_sapiens_Jun_2002_Chr21+22 Human_Jun_2002 Human 28jun2002 Human_28jun2002 hs.NCBIv30 hg12 human_ncbi30 ncbi.v30 Human_Jun_2002_Chr21+22 hs:Jun_2002 Hs:Jun_2002 hs:NCBI30 Hs:NCBIv30 Hs;NCBIv30 Hs:NCBI30
151     H_sapiens_Mar_2006 http://www.ncbi.nlm.nih.gov/genome/H_sapiens/B36.1 http://www.ncbi.nlm.nih.gov/genome/H_sapiens/B36.1/
152     H_sapiens_Mar_2006 Human_Mar_2006 hs.NCBIv36 hg18 human_ncbi36 ncbi.v36 hs:Mar_2006 Hs:Mar_2006 hs:NCBIv36 Hs:NCBIv36 chado/chado-Hsa-18 human/18 Hs;NCBIv36 Hs:NCBI36 Hsa ensembl2034
153     H_sapiens_May_2004 http://www.ncbi.nlm.nih.gov/genome/H_sapiens/B35.1 http://www.ncbi.nlm.nih.gov/genome/H_sapiens/B35.1/
154     H_sapiens_May_2004 Human_May_2004 hs.NCBIv35 hg17 human_ncbi35 ncbi.v35 hs:May_2004 Hs:May_2004 hs:NCBIv35 Hs:NCBIv35 ensembl1834 chado/chado-Hsa-17 human/17 Hs;NCBIv35 Hs:NCBI35
155     H_sapiens_Nov_2002 Human_Nov_2002 Human 14nov2002 Human_14nov2002 hs.NCBIv31 hg13 human_ncbi31 ncbi.v31 hs.exon.2 hs:Nov_2002 Hs:Nov_2002 hs:NCBIv31 Hs:NCBIv31 Hs;NCBIv31 Hs:NCBI31
156     HuEx-1_0-st-Probes HuEx-1_0-st-v2 HuEx-1_0-st HuEx-1_0-st-v2-Probes huex-1_0-st-probes huex-1_0-st-v2-probes affy/HuEx-1_0-st-Probes affy/HuEx-1_0-st-v2 affy/HuEx-1_0-st affy/HuEx-1_0-st-v2-Probes affy/huex-1_0-st-v2-probes affy/huex-1_0-st-probes
157     HuEx-1_0-st-Transcripts HuEx-1_0-st-v2-Transcripts huex-1_0-st-transcripts huex-1_0-st-v2-transcripts affy/HuEx-1_0-st-Transcripts affy/HuEx-1_0-st-v2-Transcripts affy/huex-1_0-st-transcripts affy/huex-1_0-st-v2-transcripts
158     HuGene-1_0-st-Probes HuGene-1_0-st-v1 HuGene-1_0-st HuGene-1_0-st-v1-Probes hugene-1_0-st-probes hugene-1_0-st-v1-probes affy/hugene-1_0-st-v1-probes affy/hugene-1_0-st-probes
159     HuGene-1_0-st-Transcripts HuGene-1_0-st-v1-Transcripts hugene-1_0-st-transcripts hugene-1_0-st-v1-transcripts affy/hugene-1_0-st-transcripts affy/hugene-1_0-st-v1-transcripts
160     H_vulgaris_Feb_2022 HydraT2T_AEP
161     L_africana_Jul_2009 loxAfr3 Loxodonta_africana.loxAfr3.reference
162     L_africana_Jul_2008 loxAfr2
163     L_africana_May_2005 loxAfr1
164     L_chalumnae_Aug_2011 latCha1
165     L_passim_Apr_2014 C_mellificae_Apr_2014 Crithidia_mellificae C_mellificae
166     M_acuminata_DH_Pahang_Jan_2016 M_acuminata_DH_Pahang
167     M_domestica_metatherian_Oct_2006 monDom5
168     M_domestica_metatherian_Jan_2006 monDom4
169     M_domestica_metatherian_Oct_2004 monDom1
170     M_eugenii_Sep_2009 macEug2
171     M_fascicularis_Jun_2013 macFas5
172     M_gallopavo_Dec_2009 melGal1
173     M_gallopavo_Nov_2014 melGal5
174     M_murinus_Jun_2003 micMur1 Microcebus_murinus.micMur1.reference
175     M_murinus_May_2015 micMur2
176     M_mulatta_Jan_2006 Rhesus_Jan_2006 Macaque_Jan_2006 Rhesus_macaque_Jan_2006 rheMac2 Baylor Mmul_051212 v.1.0 Macaca_mulatta.MMUL_1.reference
177     M_mulatta_Oct_2010 rheMac3
178     M_mulatta_Nov_2015 rheMac8
179     M_mulatta_Feb_2019 rheMac10
180     M_musculus_Jun_2020 mm39
181     M_musculus_Dec_2011 mm10 GRCm38
182     M_musculus_Jul_2007 Mm:NCBIv37 Mm:NCBI37 mm9
183     M_musculus_Mar_2006 Mouse_Mar_2006
184     M_musculus_Feb_2006 mm8
185     M_musculus_Feb_2006 Mm:NCBIv36 Mm:NCBI36 mm8
186     M_musculus_Aug_2005 http://www.ncbi.nlm.nih.gov/genome/M_musculus/35.1 http://www.ncbi.nlm.nih.gov/genome/M_musculus/35.1/
187     M_musculus_Aug_2005 Mouse_Aug_2005 mm7 Mm:NCBIv35 Mm:NCBI35
188     M_musculus_Feb_2002 Mouse_Feb_2002 Mouse feb2002 mm2 mm:Feb_2002 Mm:Feb_2002
189     M_musculus_Feb_2003 Mouse_Feb_2003 Mouse feb2003 mm3 mm:Feb_2003 Mm:Feb_2003 Mm:NCBIv30 Mm:NCBI30
190     M_musculus_Jul_2007 Mouse_Jul_2007 M_musculus_Aug_2007 Mouse_Aug_2007 mm9 Mm:NCBIv37 Mm:NCBI37 Mus_musculus.NCBIM37.reference
191     M_musculus_Mar_2005 http://www.ncbi.nlm.nih.gov/genome/M_musculus/34.1 http://www.ncbi.nlm.nih.gov/genome/M_musculus/34.1/
192     M_musculus_Mar_2005 Mouse_Mar_2005 mm6 Mm:NCBIv34 Mm:NCBI34
193     M_musculus_May_2004 Mouse_May_2004 Mouse may2004 mm5 mm:May_2004 Mm:May_2004 Mm:NCBIv33 Mm:NCBI33
194     M_musculus_Oct_2003 http://www.ncbi.nlm.nih.gov/genome/M_musculus/32.1 http://www.ncbi.nlm.nih.gov/genome/M_musculus/32.1/
195     M_musculus_Oct_2003 Mouse_Oct_2003 Mouse oct2003 mm4 mm:Oct_2003 Mm:Oct_2003 Mm:NCBIv32 Mm:NCBI32
196     MoEx-1_0-st-Probes MoEx-1_0-st-v1 MoEx-1_0-st MoEx-1_0-st-v1-Probes moex-1_0-st-probes moex-1_0-st-v1-probes affy/moex-1_0-st-probes affy/moex-1_0-st-v1-probes
197     MoEx-1_0-st-Transcripts MoEx-1_0-st-v1-Transcripts moex-1_0-st-transcripts moex-1_0-st-v1-transcripts affy/moex-1_0-st-transcripts affy/moex-1_0-st-v1-transcripts
198     MoGene-1_0-st-Probes MoGene-1_0-st-v1 MoGene-1_0-st MoGene-1_0-st-v1-Probes mogene-1_0-st-probes mogene-1_0-st-v1-probes affy/mogene-1_0-st-v1-probes affy/mogene-1_0-st-probes
199     MoGene-1_0-st-Transcripts MoGene-1_0-st-v1-Transcripts mogene-1_0-st-transcripts mogene-1_0-st-v1-transcripts affy/mogene-1_0-st-transcripts affy/mogene-1_0-st-v1-transcripts
200     M_lucifugus_Mar_2006 myoLuc1 Myotis_lucifugus.MICROBAT1.reference
201     M_lucifugus_Jul_2010 myoLuc2
202     M_pentadactyla_Aug_2014 manPen1
203     M_putorius_furo_Apr_2011 musFur1
204     M_undulatus_Sep_2011 melUnd1
205     M_virus_May_2022 mpxvRivers
206     N_larvatus_Nov_2014 nasLar1
207     N_leucogenys_Oct_2012 nomLeu3
208     N_leucogenys_Jun_2011 nomLeu2
209     N_leucogenys_Jan_2010 nomLeu1
210     N_parkeri_Mar_2015 nanPar1
211     N_schauinslandi_Jun_2017 neoSch1
212     O_anatinus_Feb_2007 ornAna2
213     O_anatinus_Mar_2007 ornAna1
214     O_aries_Nov_2015 oviAri4
215     O_aries_Aug_2012 oviAri3
216     O_aries_Feb_2010 oviAri1 Ovis_aries_1.0
217     O_cuniculus_Apr_2009 oryCun2 Oryctolagus_cuniculus.oryCun2.reference
218     O_cuniculus_May_2005 oryCun1
219     O_garnettii_Dec_2006 otoGar1 Otolemur_garnetti.BUSHBABY1.reference Otolemur_garnettii.BUSHBABY1.reference
220     O_garnettii_Mar_2011 otoGar3
221     O_latipes_Oct_2005 oryLat2 Oryzias_latipes.MEDAKA1.reference
222     O_latipes_Jul_2017 ASM223467v1
223     O_niloticus_Jan_2011 oreNil2
224     O_princeps_May_2012 ochPri3
225     O_princeps_Jul_2008 ochPri2 Ochotona_princeps.pika.reference
226     O_sativa_japonica_Jan_2007 O_sativa_Jan_2007 Rice_Tigr_Pseudomolecules_5 TIGR_pseudomol5
227     O_sativa_japonica_Jun_2009 O_sativa_Jun_2009 RGAP_Pseudomolecules_6 RGAP_pseudomolecules_6 RGAP_pseudomol6 Rice_Tigr_Pseudomolecules_6 TIGR_pseudomol6
228     P_abelii_Jan_2018 ponAbe3
229     P_abelii_Jul_2007 ponAbe2
230     P_anubis_Apr_2017 papAnu4
231     P_anubis_Mar_2012 papAnu2
232     P_capensis_Jul_2008 proCap1 Procavia_capensis.proCap1.reference
233     P_hamadryas_Nov_2008 papHam1
234     P_marinus_Dec_2017 petMar3
235     P_marinus_Sep_2010 petMar2
236     P_marinus_Mar_2007 petMar1
237     P_pacificus_Feb_2007 priPac1
238     P_paniscus_May_2020 panPan3
239     P_paniscus_Aug_2015 panPan2
240     P_paniscus_May_2012 panPan1
241     P_patens_Jan_2018 Physcomitrella_patens_JGI_v3.3
242     P_patens_Jan_2008 Physcomitrella_patens_JGI_assembly_release_v1.1_and_COSMOSS_annotation_v1.6
243     P_persica_Apr_2010 Prunus_persica_JGI_release_v1.0
244     P_trichocarpa_Aug_2012 Populus_trichocarpa_JGI_assembly_release_v3.0_annotation_v3.0
245     P_troglodytes_Jan_2018 panTro6
246     P_troglodytes_May_2016 panTro5
247     P_troglodytes_Feb_2011 panTro4
248     P_troglodytes_Oct_2010 panTro3 CGSC 2.1.3
249     P_troglodytes_Mar_2006 panTro2 Pan_troglodytes.CHIMP2.1.reference
250     P_troglodytes_Nov_2003 panTro1 Chimp_Nov_2003 CGSC Build 1 Version 1
251     P_vampyrus_Jul_2008 pteVam1 Pteropus_vampyrus.pteVam1.reference
252     RaEx-1_0-st-Probes RaEx-1_0-st-v1 RaEx-1_0-st RaEx-1_0-st-v1-Probes raex-1_0-st-probes raex-1_0-st-v1-probes affy/raex-1_0-st-probes affy/raex-1_0-st-v1-probes
253     RaEx-1_0-st-Transcripts RaEx-1_0-st-v1-Transcripts raex-1_0-st-transcripts raex-1_0-st-v1-transcripts affy/raex-1_0-st-transcripts affy/raex-1_0-st-v1-transcripts
254     RaGene-1_0-st-Probes RaGene-1_0-st-v1 RaGene-1_0-st RaGene-1_0-st-v1-Probes ragene-1_0-st-probes ragene-1_0-st-v1-probes affy/ragene-1_0-st-v1-probes affy/ragene-1_0-st-probes
255     RaGene-1_0-st-Transcripts RaGene-1_0-st-v1-Transcripts ragene-1_0-st-transcripts ragene-1_0-st-v1-transcripts affy/ragene-1_0-st-transcripts affy/ragene-1_0-st-v1-transcripts
256     R_communis_May_2008 Ricinus_communis_JGI_v0.1
257     R_norvegicus_Jan_2003 Rat_Jan_2003 Rat jan2003 rn2 rn:Jan_2003 Rn:Jan_2003
258     R_norvegicus_Jun_2003 Rat_Jun_2003 Rat jun2003 rn3 rn:Jun_2003 Rn:Jun_2003
259     R_norvegicus_Nov_2002 Rat_Nov_2002 Rat nov2002 rn1 rn:Nov_2002 Rn:Nov_2002
260     R_norvegicus_Nov_2004 Rat_Nov_2004 Rat nov2004 rn4 rn:Nov_2004 Rn:Nov_2004
261     R_norvegicus_Mar_2012 Rat_Mar_2012 Rat mar2012 rn5 RGSC 5.0
262     R_norvegicus_Jul_2014 rn6
263     R_norvegicus_Nov_2020 rn7
264     R_roxellana_Oct_2014 rhiRox1
265 nfreese 199 R_varieornatus_YOKOZUNA-1_Nov_2016 Rvar_4.0
266 pkulzer 230 S_araneus_Aug_2008 sorAra2
267     S_araneus_Jun_2006 sorAra1
268     S_boliviensis_Oct_2011 saiBol1
269     S_cerevisiae_Apr_2011 sacCer3
270     S_cerevisiae_Jun_2008 sacCer2
271     S_cerevisiae_Oct_2003 sacCer1 sc:Oct_2003 Sc:Oct_2003 S_cerevisiae_Oct_2003_and_S_pombe_Jul_2005
272     S_araneus_Jun_2006 sorAra1 Sorex_araneus.COMMON_SHREW1.reference
273     S_harrisii_Feb_2011 sarHar1
274     S_lycopersicum_Feb_2014 Solanum_lycopersicum_Sol_Genomics_itag2.4
275     S_lycopersicum_May_2012 Solanum_lycopersicum_ITAG_2.3
276     S_pombe_Sep_2004 Sp:Sep_2004 sp:Sep_2004
277     S_pombe_May_2012 sp:May_2012
278     S_purpuratus_Apr_2005 strPur1
279     S_purpuratus_Sep_2006 strPur2
280     S_scrofa_Feb_2017 susScr11
281     S_scrofa_Aug_2011 susScr3
282     S_scrofa_Nov_2009 susScr2 Sscrofa9.2
283     S_tridecemlineatus_Feb_2008 speTri1 Spermophilus_tridecemlineatus.SQUIRREL.reference
284     S_tridecemlineatus_Nov_2011 speTri2
285     S_tuberosum_DM_Jul_2011 Solanum_tuberosum_JGI_v4.03 Solanum tuberosum Group Phureja clone DM1-3 potato doubled monoploid S_tuberosum_DM
286     S_virus_Jan_2020 wuhCor1
287     T_belangeri_Dec_2006 tupBel1
288     T_guttata_Feb_2013 taeGut2
289     T_guttata_Jul_2008 taeGut1
290     T_manatus_latirostris_Oct_2011 triMan1
291     T_nigroviridis_Feb_2004 tetNig1
292     T_nigroviridis_Mar_2007 tetNig2
293     T_rubripes_Aug_2002 fr1
294     T_rubripes_Oct_2004 fr2
295     T_rubripes_Oct_2011 fr3
296     T_belangeri_Dec_2006 tupBel1 Tupaia_belangeri.TREESHREW.reference
297     T_sirtalis_Jun_2015 thaSir1
298     T_syrichta_Sep_2013 tarSyr2
299     T_syrichta_Aug_2008 tarSyr1 Tarsius_syrichta.tarSyr1.reference
300     T_truncatus_Oct_2011 turTru2
301     T_truncatus_Feb_2008 turTru1 Tursiops_truncatus.turTru1.reference
302     V_cardui_Feb_2021 ilVanCard2.1
303     V_pacos_Mar_2013 vicPac2
304     V_pacos_Jul_2008 vicPac1 Vicugna_pacos.vicPac1.reference
305     V_vinifera_Mar_2010 Vitis_vinifera_JGI_12xMarch2010
306     X_laevis_Aug_2016 xenLae2
307     X_tropicalis_Jul_2016 xenTro9
308     X_tropicalis_Sep_2012 xenTro7
309     X_tropicalis_Nov_2009 xenTro3
310     X_tropicalis_Aug_2005 xenTro2 Xenopus_tropicalis.JGI4.1.reference
311     X_tropicalis_Oct_2004 xenTro1 Xenopus_tropicalis.JGI3.0.reference
312     Y_lipolytica_CLIB122_Jul_2004 Yarrowia_lipolytica_CLIB122 Y_lipolytica_CLIB122
313     Y_lipolytica_PO1f_May_2014 Yarrowia_lipolytica_PO1f Y_lipolytica_PO1f
314     Y_lipolytica_WSH-Z06_Mar_2014 Yarrowia_lipolytica_WSH-Z06 Y_lipolytica_WSH-Z06
315     Z_mays_B73_Mar_2010 Zea_mays_B73_RefGen_v2

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